Miyakogusa Predicted Gene

Lj3g3v1089390.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1089390.3 Non Chatacterized Hit- tr|I1LTK6|I1LTK6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.04,0,CYCLIC
NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE AND LIGAND GATED POTASSIUM
CHANNEL,NULL; no descriptio,CUFF.42166.3
         (2166 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS349145 similar to UniRef100_A7NZL2 Cluster: Chromosom...   232   7e-60
gnl|LJGI|TC64938 similar to UniRef100_A7QFZ6 Cluster: Chromosome...    60   6e-08

>gnl|LJGI|FS349145 similar to UniRef100_A7NZL2 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 679

 Score =  232 bits (117), Expect = 7e-60
 Identities = 351/429 (81%)
 Strand = Plus / Minus

                                                                       
Query: 226 aagttcttgaaagcaagagtactgtcaagagtgttctcagaggactacgagagagtgaag 285
           |||||||||||||| |||||  |||||||||| |||||||||||||| |||||||| || 
Sbjct: 461 aagttcttgaaagctagagtgttgtcaagagtattctcagaggactatgagagagtaaaa 402

                                                                       
Query: 286 agaagggtgttagatcctcgcggacaaacaatccaccgttggaacaagattttcttaata 345
           |||||  | |||||||| |  |||||||| || |||   |||||||||||||||||  ||
Sbjct: 401 agaagaatattagatccccagggacaaaccattcacaaatggaacaagattttcttggta 342

                                                                       
Query: 346 gcatcattagtgtctttgtttgtagacccgttgttcttttatttgccagtggttcaagat 405
           ||||  ||||| ||||||||||| |||||  ||||||| ||||||||| | |||  ||||
Sbjct: 341 gcatgtttagtttctttgtttgtggaccctctgttcttatatttgccactagttagagat 282

                                                                       
Query: 406 gaagtgtgcatagacattggaacaactcttgaagttatccttacagttgttagatcagtt 465
           ||||||||||| || ||||||| |   |||||||||| ||| | |||| | |||||| | 
Sbjct: 281 gaagtgtgcatcgatattggaatagaacttgaagttaccctcatagttatcagatcaatg 222

                                                                       
Query: 466 ggggatgtgttttacatgattcagattatgatgaagtttcgtacagcttatgttgctcct 525
           |  |||    ||||||| ||||||||| | |||||||||||||| |||||||| || |||
Sbjct: 221 gcagattccctttacataattcagattctcatgaagtttcgtacggcttatgtcgcacct 162

                                                                       
Query: 526 tcttcacaagtatttgggagaggagaacttgttctaggctattctaagattgctgttagg 585
           ||||| |  || || || ||||||||||||||| ||  || ||||||||| |||  ||||
Sbjct: 161 tcttcgcgcgttttcggaagaggagaacttgttataaactcttctaagatagctactagg 102

                                                                       
Query: 586 tacctcagaaagggattctggttagactgtgtagctgcattgccccttcctcaggtattg 645
           ||||| ||||| || ||||||||||||| ||| || ||| |||| ||||||||||| |||
Sbjct: 101 tacctaagaaaaggtttctggttagactttgttgccgcactgcctcttcctcaggtgttg 42

                    
Query: 646 atttggatt 654
           |||||||||
Sbjct: 41  atttggatt 33


>gnl|LJGI|TC64938 similar to UniRef100_A7QFZ6 Cluster: Chromosome chr9 scaffold_90,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_90, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 758

 Score = 60.0 bits (30), Expect = 6e-08
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 1891 ttttactcacaccaatggagaacttgggctgcttgtttcattcaagctgcatgg 1944
            |||||||| || |||||||||||||||||||| || || || ||||||||||||
Sbjct: 219  ttttactcgcaacaatggagaacttgggctgcgtgctttatccaagctgcatgg 272