Miyakogusa Predicted Gene
- Lj3g3v1088360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1088360.1 Non Chatacterized Hit- tr|F6GU16|F6GU16_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,83.78,0,seg,NULL; Nucleotide-diphospho-sugar transferases,NULL; no
description,NULL,CUFF.42161.1
(2814 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP041404 similar to UniRef100_A7NZL0 Cluster: Chromosom... 791 0.0
gnl|LJGI|FS358252 similar to UniRef100_A7NZL0 Cluster: Chromosom... 248 2e-64
gnl|LJGI|FS332015 113 6e-24
>gnl|LJGI|BP041404 similar to UniRef100_A7NZL0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 502
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Plus
Query: 1 atggtttttggtcgaaattcgagttcgagaagcggggatagctcggaagggatggtggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atggtttttggtcgaaattcgagttcgagaagcggggatagctcggaagggatggtggtt 163
Query: 61 aatgaccatgctggtggaattggaaaggccaaattgaaggctcaaaaaattgcttccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 aatgaccatgctggtggaattggaaaggccaaattgaaggctcaaaaaattgcttccacc 223
Query: 121 aacactaagcttgttgcagtactcacatgcttccaatttatgtttgcaggatatgcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aacactaagcttgttgcagtactcacatgcttccaatttatgtttgcaggatatgcaaca 283
Query: 181 ttcctattgtactatatcagtccttccatagatttacaaaccaagccagattttacatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttcctattgtactatatcagtccttccatagatttacaaaccaagccagattttacatgg 343
Query: 241 gctactcattttgcaaaccaatggaagcagattctgatcaaacctcatgtggtcagtcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gctactcattttgcaaaccaatggaagcagattctgatcaaacctcatgtggtcagtcac 403
Query: 301 tatcaagatgcttcttctctcatcaaagaggaaattaaattcaaaccaatcacagaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tatcaagatgcttcttctctcatcaaagaggaaattaaattcaaaccaatcacagaagta 463
Query: 361 tgccaaaatgagaagatagatttcatgcaaaagaagtcc 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgccaaaatgagaagatagatttcatgcaaaagaagtcc 502
>gnl|LJGI|FS358252 similar to UniRef100_A7NZL0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 430
Score = 248 bits (125), Expect = 2e-64
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 2690 ctctcaaggggctaaagagtgctggagctaagttgggccaagatgtgcttagatgtgaca 2749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctctcaaggggctaaagagtgctggagctaagttgggccaagatgtgcttagatgtgaca 371
Query: 2750 atgccactgaaattgtagctgtggatcatgatacaggtctgccacacagatgcgccaaat 2809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atgccactgaaattgtagctgtggatcatgatacaggtctgccacacagatgcgccaaat 311
Query: 2810 tctaa 2814
|||||
Sbjct: 310 tctaa 306
>gnl|LJGI|FS332015
Length = 332
Score = 113 bits (57), Expect = 6e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 1 atggtttttggtcgaaattcgagttcgagaagcggggatagctcggaagggatggtg 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atggtttttggtcgaaattcgagttcgagaagcggggatagctcggaagggatggtg 332