Miyakogusa Predicted Gene
- Lj3g3v1075010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1075010.1 Non Chatacterized Hit- tr|H9WV19|H9WV19_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,59.02,0.00000000007,seg,NULL,TC64357.path2.1
(580 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64357 similar to UniRef100_Q9LN08 Cluster: T6D22.8; n... 1150 0.0
gnl|LJGI|TC70985 similar to UniRef100_A7NZK1 Cluster: Chromosome... 228 3e-59
gnl|LJGI|AV768588 similar to UniRef100_A7WG14 Cluster: Homoserin... 149 2e-35
gnl|LJGI|BP053054 weakly similar to UniRef100_Q9LN08 Cluster: T6... 133 1e-30
gnl|LJGI|BP075663 90 2e-17
>gnl|LJGI|TC64357 similar to UniRef100_Q9LN08 Cluster: T6D22.8; n=1; Arabidopsis
thaliana|Rep: T6D22.8 - Arabidopsis thaliana (Mouse-ear
cress), partial (9%)
Length = 1027
Score = 1150 bits (580), Expect = 0.0
Identities = 580/580 (100%)
Strand = Plus / Plus
Query: 1 atgaatggaggcgctatgaactttgaaagcgaaaacacaagtgcttcacatgatactgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 atgaatggaggcgctatgaactttgaaagcgaaaacacaagtgcttcacatgatactgga 82
Query: 61 ttcttcaggtttgaggcatcagacaaggaagggtcgtatggtgatagacccatgcctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ttcttcaggtttgaggcatcagacaaggaagggtcgtatggtgatagacccatgcctgat 142
Query: 121 tgggtgggatggggggaaccttcagatatgcaagttggtaactcaagcacgaatcccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tgggtgggatggggggaaccttcagatatgcaagttggtaactcaagcacgaatcccttt 202
Query: 181 gtagatcatgatgagtctggaaataacctttctagtaaacctgaattaggtagccctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gtagatcatgatgagtctggaaataacctttctagtaaacctgaattaggtagccctaat 262
Query: 241 cctagttctccttcaaacggggaaactgtttcttcaaatgggttgccatctactatagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cctagttctccttcaaacggggaaactgtttcttcaaatgggttgccatctactatagat 322
Query: 301 tccatggaggggattgtggagtcaagtcaaagatcaggagcagtaccctcgctgtttgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tccatggaggggattgtggagtcaagtcaaagatcaggagcagtaccctcgctgtttgag 382
Query: 361 gaggatgttgaatttgtaggtgtagaattagaaggcactgagaaggctatggatcaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaggatgttgaatttgtaggtgtagaattagaaggcactgagaaggctatggatcaggct 442
Query: 421 ctgaaagaagggatagttggggaagcaggaccattgaaaagaaacatggtccctaaagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctgaaagaagggatagttggggaagcaggaccattgaaaagaaacatggtccctaaagtg 502
Query: 481 gcagaaaaggaaaattccgaagagggcggtgccggagtgaaggaattcaatgatactaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcagaaaaggaaaattccgaagagggcggtgccggagtgaaggaattcaatgatactaac 562
Query: 541 tactggagggttgaccaagaggttgctgttctagagtgat 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tactggagggttgaccaagaggttgctgttctagagtgat 602
>gnl|LJGI|TC70985 similar to UniRef100_A7NZK1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1341
Score = 228 bits (115), Expect = 3e-59
Identities = 223/259 (86%)
Strand = Plus / Plus
Query: 322 tcaagtcaaagatcaggagcagtaccctcgctgtttgaggaggatgttgaatttgtaggt 381
||||| |||||||| | || ||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 646 tcaagccaaagatccgtagtagtaccctccctatttgaagaggatgtggaatttgtaggt 705
Query: 382 gtagaattagaaggcactgagaaggctatggatcaggctctgaaagaagggatagttggg 441
||||||||||| || | |||||||| ||||| |||||||| |||||||| |||||||||
Sbjct: 706 gtagaattagatggtgccgagaaggcaatggaccaggctctcaaagaaggaatagttggg 765
Query: 442 gaagcaggaccattgaaaagaaacatggtccctaaagtggcagaaaaggaaaattccgaa 501
|||||||||||||| ||||||||| | ||||| || || |||||||||||||||||||
Sbjct: 766 gaagcaggaccattaaaaagaaacctagtcccagaattgccagaaaaggaaaattccgat 825
Query: 502 gagggcggtgccggagtgaaggaattcaatgatactaactactggagggttgaccaagag 561
|||| | || | || |||||||| |||||||| | || ||||||||| |||||||||||
Sbjct: 826 gaggccagtccgggtgtgaaggagttcaatgacgcaaattactggaggattgaccaagag 885
Query: 562 gttgctgttctagagtgat 580
|||||||||||||| ||||
Sbjct: 886 gttgctgttctagaatgat 904
>gnl|LJGI|AV768588 similar to UniRef100_A7WG14 Cluster: Homoserine dehydrogenase; n=1;
Hydrogenobaculum sp. Y04AAS1|Rep: Homoserine
dehydrogenase, partial (3%)
Length = 393
Score = 149 bits (75), Expect = 2e-35
Identities = 114/127 (89%)
Strand = Plus / Minus
Query: 444 agcaggaccattgaaaagaaacatggtccctaaagtggcagaaaaggaaaattccgaaga 503
|||||| || || |||| |||||||||||||||||||||| |||| ||||||||| || |
Sbjct: 393 agcaggcccctttaaaaaaaacatggtccctaaagtggcaaaaaaagaaaattccaaaaa 334
Query: 504 gggcggtgccggagtgaaggaattcaatgatactaactactggagggttgaccaagaggt 563
|||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||| ||||
Sbjct: 333 gggcggggccggagtgaaggaattcaattatactaactcctggagggttggccaaaaggt 274
Query: 564 tgctgtt 570
|||||||
Sbjct: 273 tgctgtt 267
>gnl|LJGI|BP053054 weakly similar to UniRef100_Q9LN08 Cluster: T6D22.8; n=1;
Arabidopsis thaliana|Rep: T6D22.8 - Arabidopsis thaliana
(Mouse-ear cress), partial (3%)
Length = 457
Score = 133 bits (67), Expect = 1e-30
Identities = 85/89 (95%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 487 aaggaaaattccgaagagggcggtgc-cggagtgaaggaattcaatgatactaactactg 545
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 457 aaggaaaattccgaagagg-cggtgcncggagtgaaggaattcaatgatactaactactg 399
Query: 546 gagggttgaccaagaggttgctgttctag 574
|||| |||||| |||||||||||||||||
Sbjct: 398 gaggnttgaccnagaggttgctgttctag 370
>gnl|LJGI|BP075663
Length = 451
Score = 89.7 bits (45), Expect = 2e-17
Identities = 102/117 (87%), Gaps = 3/117 (2%)
Strand = Plus / Minus
Query: 410 tggatcaggctctgaaagaagggatagttggggaagcaggaccattgaaaagaaaca-tg 468
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 451 tggatcaggctctgaaagaagggatagttggggaagcaggccccggcccaagaaacagtg 392
Query: 469 gtccctaaagtggcagaaaaggaaaa-ttccgaaga-gggcggtgccggagtgaagg 523
|||| ||| ||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 391 gtccgtaacctggcagagaaggaaaaggtccgaagacgggcggtgccggagtgaagg 335