Miyakogusa Predicted Gene
- Lj3g3v1064900.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1064900.2 tr|G7LBV8|G7LBV8_MEDTR Cysteine-rich
receptor-like protein kinase OS=Medicago truncatula
GN=MTR_8g05,81.59,0,no description,NULL; seg,NULL; Tyrosine kinase,
catalytic domain,Tyrosine-protein kinase, catalytic ,CUFF.42209.2
(1248 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69319 similar to UniRef100_A7P266 Cluster: Chromosome... 565 e-160
gnl|LJGI|FS359921 similar to UniRef100_A7P266 Cluster: Chromosom... 78 1e-13
gnl|LJGI|TC78739 similar to UniRef100_A7Q6U0 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC69319 similar to UniRef100_A7P266 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1124
Score = 565 bits (285), Expect = e-160
Identities = 330/345 (95%)
Strand = Plus / Plus
Query: 900 ctgtgttgaagaggatcaactgttgctcatatatgaatacatggaaaacaatagccttgc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtgttgaagaggatcaactgttgctcatatatgaatacatggaaaacaatagccttgc 60
Query: 960 acgtgctttatttgtaaaaaaggaagaccaggagaaacatcaattgaaattggattggca 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acgtgctttatttgtaaaaaaggaagaccaggagaaacatcaattgaaattggattggca 120
Query: 1020 aacaaggaagaggatttgtgttggtattgctaaaggtttagcttaccttcatggagagtc 1079
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 aacaaggaagaggatttgtgttggtattgctaaaagtttagcttaccttcatggagagtc 180
Query: 1080 aagacttaaggtcgttcatagggacatcaaggccactaatgtgttacttgataaagatct 1139
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 aagacttaaggtcgttcatagggacatcaaggccactaatgtgttactggataaagatct 240
Query: 1140 caacccaaaaatttctgattttggcttggccaagctttatgaagaggacaaaacccacat 1199
||||||||| || ||||||||||| |||||||||||| |||| || || || ||||| ||
Sbjct: 241 caacccaaagatatctgattttggtttggccaagcttaatgatgaagataagacccatat 300
Query: 1200 gagcaccagaatagccggcacttatgggtacatggctcctgagta 1244
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 agacaccagaatagctggcacttatgggtacatggctcctgagta 345
>gnl|LJGI|FS359921 similar to UniRef100_A7P266 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 798
Score = 77.8 bits (39), Expect = 1e-13
Identities = 46/47 (97%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 1198 atgagcaccagaatagccggcacttatgggtacatggctcctgagta 1244
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 798 atgagcaccagaatagccggcacttat-ggtacatggctcctgagta 753
>gnl|LJGI|TC78739 similar to UniRef100_A7Q6U0 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1512
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 726 caagattggagaaggaggttttggtcctgtttacaaggg 764
|||| ||||||||||||||||||| |||||||| |||||
Sbjct: 302 caagcttggagaaggaggttttggacctgtttataaggg 340