Miyakogusa Predicted Gene
- Lj3g3v1061300.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1061300.2 Non Chatacterized Hit- tr|I1M319|I1M319_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7302 PE=,87.55,0,TPR
REPEAT CONTAINING PROTEIN,NULL; TPR_11,NULL; TPR_2,Tetratricopeptide
TPR2; Thioredoxin,Thioredox,CUFF.42094.2
(1479 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75150 similar to UniRef100_A7P1Y9 Cluster: Chromosome... 577 e-164
gnl|LJGI|TC70523 weakly similar to UniRef100_A7P1Y9 Cluster: Chr... 339 3e-92
gnl|LJGI|TC69654 similar to UniRef100_A7P1Y9 Cluster: Chromosome... 192 4e-48
gnl|LJGI|TC64532 similar to UniRef100_A7PJG7 Cluster: Chromosome... 54 3e-06
>gnl|LJGI|TC75150 similar to UniRef100_A7P1Y9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1074
Score = 577 bits (291), Expect = e-164
Identities = 291/291 (100%)
Strand = Plus / Plus
Query: 60 ggagctcaagaaagcagggaatgagcattacaagaagggtcactttgcggatgcgttgag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ggagctcaagaaagcagggaatgagcattacaagaagggtcactttgcggatgcgttgag 843
Query: 120 cttttatgaccgcgcgattgcgttgtcgccggccagccctgcttaccggagcaaccgtgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 cttttatgaccgcgcgattgcgttgtcgccggccagccctgcttaccggagcaaccgtgc 903
Query: 180 cgcggcgctgacgggtttgaaacggctggtggaagcggtgagggaatgtgaggaagctgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cgcggcgctgacgggtttgaaacggctggtggaagcggtgagggaatgtgaggaagctgt 963
Query: 240 gagattggatcctaattatagcagggctcatcagcgtttggcttctctttttctcaggtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 gagattggatcctaattatagcagggctcatcagcgtttggcttctctttttctcaggtt 1023
Query: 300 aggacaagttgagaatgccaggaagcacctctgttatccggggctgcatcc 350
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 aggacaagttgagaatgccaggaagcacctctgttatccggggctgcatcc 1074
Score = 121 bits (61), Expect = 1e-26
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 atgttctcggttccggtacgaccaactatggccacggaagcattatgcgtggcggcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 atgttctcggttccggtacgaccaactatggccacggaagcattatgcgtggcggcggcg 716
Query: 61 g 61
|
Sbjct: 717 g 717
>gnl|LJGI|TC70523 weakly similar to UniRef100_A7P1Y9 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 1141
Score = 339 bits (171), Expect = 3e-92
Identities = 176/178 (98%)
Strand = Plus / Plus
Query: 1302 tccatctattaacttcctcaaggtggacattcaagaaagcccgacaattgcaaccgctga 1361
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccatctattaacttcctncaggtggacattcaagaaagcccgacaattgcaaccgctga 60
Query: 1362 gaacgttagggttgtaccaaccttcaagatatacaaaaatggcagtagagtgaaggaaat 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacgttagggttgtaccaaccttcaagatatacaaaaatggcagtagagtgaaggaaat 120
Query: 1422 catttgccctagtcgcgacatattggaacacactgtgaggcattacagctcttagcac 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catttgccctagtcgcgacatattggaacacactgtgaggcattacagctcttagcac 178
>gnl|LJGI|TC69654 similar to UniRef100_A7P1Y9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 841
Score = 192 bits (97), Expect = 4e-48
Identities = 160/181 (88%)
Strand = Plus / Plus
Query: 1291 tgtggtcgatatccatctattaacttcctcaaggtggacattcaagaaagcccgacaatt 1350
|||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 7 tgtgctcgctatccatctattaacttccttaaggtggatattcaagaaagcccgacaatt 66
Query: 1351 gcaaccgctgagaacgttagggttgtaccaaccttcaagatatacaaaaatggcagtaga 1410
|| || |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 67 gctactgctgagaatattaggattgtaccaaccttcaagatatacaaaaatggcagtcga 126
Query: 1411 gtgaaggaaatcatttgccctagtcgcgacatattggaacacactgtgaggcattacagc 1470
||||||||||| || ||||||| ||| || || ||||||| |||| ||||| ||||||
Sbjct: 127 gtgaaggaaattatatgccctactcgtgatatgctggaacattctgttaggcactacagc 186
Query: 1471 t 1471
|
Sbjct: 187 t 187
>gnl|LJGI|TC64532 similar to UniRef100_A7PJG7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 1282
Score = 54.0 bits (27), Expect = 3e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 652 gctcagattgagatggcattgggaaggtttgagagtgcagttacagc 698
|||||| |||| |||||||||||||||||||||| ||| || |||||
Sbjct: 48 gctcaggttgaaatggcattgggaaggtttgagaatgctgtcacagc 94