Miyakogusa Predicted Gene

Lj3g3v1048960.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1048960.1 tr|I1KU89|I1KU89_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.27961 PE=3
SV=1,81.05,0,UCH,Peptidase C19, ubiquitin carboxyl-terminal hydrolase
2; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAM,CUFF.42063.1
         (1935 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77027 similar to UniRef100_Q9FPS2 Cluster: Ubiquitin ...   827   0.0  

>gnl|LJGI|TC77027 similar to UniRef100_Q9FPS2 Cluster: Ubiquitin carboxyl-terminal
           hydrolase 25; n=1; Arabidopsis thaliana|Rep: Ubiquitin
           carboxyl-terminal hydrolase 25 - Arabidopsis thaliana
           (Mouse-ear cress), partial (19%)
          Length = 581

 Score =  827 bits (417), Expect = 0.0
 Identities = 417/417 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccctgcagatgtcctggcagccgaatctcctgagtcagaagcgcaaaaccggtgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atggccctgcagatgtcctggcagccgaatctcctgagtcagaagcgcaaaaccggtgct 224

                                                                       
Query: 61  cctcccttaggtctccgtaacctcggcaactcctgctacctcaacagcgttctccagtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 cctcccttaggtctccgtaacctcggcaactcctgctacctcaacagcgttctccagtgc 284

                                                                       
Query: 121 ctcacctacactcctcctctcgccaatttctgcctccgtttccaacactcttctctctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctcacctacactcctcctctcgccaatttctgcctccgtttccaacactcttctctctgt 344

                                                                       
Query: 181 gattcttctgcttcttcctcgtgcccgttctgcatactcgagaagcagattgcgcgttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gattcttctgcttcttcctcgtgcccgttctgcatactcgagaagcagattgcgcgttct 404

                                                                       
Query: 241 ctcaagttagatctcgcgcacgacgctcctgccaagattcagagctgtctccggatcttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctcaagttagatctcgcgcacgacgctcctgccaagattcagagctgtctccggatcttc 464

                                                                       
Query: 301 gctgagcatttccgctgtggtcgtcaggaggacgcgcacgagttcctccgctacgttatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gctgagcatttccgctgtggtcgtcaggaggacgcgcacgagttcctccgctacgttatt 524

                                                                    
Query: 361 gacgcctgccataacacctgcctccgcctcaagaagcttcgccggaaagggggtggt 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gacgcctgccataacacctgcctccgcctcaagaagcttcgccggaaagggggtggt 581