Miyakogusa Predicted Gene

Lj3g3v1038670.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1038670.1 Non Chatacterized Hit- tr|I1I0R3|I1I0R3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,47.92,3e-19,Possibly involved in carbohydrate binding,X8; X8,X8;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.42044.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58603 weakly similar to UniRef100_A7QQM3 Cluster: Chr...   678   0.0  
gnl|LJGI|GO032427 homologue to UniRef100_A6TRZ8 Cluster: Respons...    96   2e-19

>gnl|LJGI|TC58603 weakly similar to UniRef100_A7QQM3 Cluster: Chromosome undetermined
           scaffold_143, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (49%)
          Length = 796

 Score =  678 bits (342), Expect = 0.0
 Identities = 342/342 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctaaattgggtgctcttcttttccttgtgttcttgtctctcactgcagcagggaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atggctaaattgggtgctcttcttttccttgtgttcttgtctctcactgcagcagggaat 181

                                                                       
Query: 61  ctgatgatggtgaatgggcagaaaacatggtgtgttgcaaaaccttcatcagaccaagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgatgatggtgaatgggcagaaaacatggtgtgttgcaaaaccttcatcagaccaagct 241

                                                                       
Query: 121 acccttttgtccaacatcaactatgcttgcgctcacgtggattgccagattatgcagaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acccttttgtccaacatcaactatgcttgcgctcacgtggattgccagattatgcagaga 301

                                                                       
Query: 181 ggatgcccctgttctagccctgacagtctcatcaaccgtgcctccatagccatgaatatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggatgcccctgttctagccctgacagtctcatcaaccgtgcctccatagccatgaatatc 361

                                                                       
Query: 241 tattatcagtccaagggaagaaaccactggaactgtgatttcagagcctctggccttgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tattatcagtccaagggaagaaaccactggaactgtgatttcagagcctctggccttgtt 421

                                                     
Query: 301 gttgtcaccgatcccagttatggtaactgcatttatgcttag 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gttgtcaccgatcccagttatggtaactgcatttatgcttag 463


>gnl|LJGI|GO032427 homologue to UniRef100_A6TRZ8 Cluster: Response regulator
          receiver protein; n=1; Alkaliphilus metalliredigens
          QYMF|Rep: Response, partial (2%)
          Length = 621

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                              
Query: 1  atggctaaattgggtgctcttcttttccttgtgttcttgtctctcactgcag 52
          |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 27 atggctaaattgagtgctcttcttttccttgtgttcttgtctctcactgcag 78