Miyakogusa Predicted Gene
- Lj3g3v1011180.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1011180.2 Non Chatacterized Hit- tr|G7JF26|G7JF26_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,77.05,0,GB DEF:
OSJNBA0089N06.9 PROTEIN,NULL; UNCHARACTERIZED,UHRF1-binding protein
1-like; Chorein_N,Vacuol,CUFF.42005.2
(3639 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320571 similar to UniRef100_A7P0Z0 Cluster: Chromosom... 462 e-129
gnl|LJGI|BP052898 weakly similar to UniRef100_A7P0Z0 Cluster: Ch... 400 e-110
gnl|LJGI|TC59483 similar to UniRef100_A7P0Z0 Cluster: Chromosome... 333 5e-90
gnl|LJGI|FS351954 similar to UniRef100_A7P0Z0 Cluster: Chromosom... 204 3e-51
gnl|LJGI|TC66262 similar to UniRef100_A7P0Z0 Cluster: Chromosome... 163 1e-38
>gnl|LJGI|FS320571 similar to UniRef100_A7P0Z0 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 800
Score = 462 bits (233), Expect = e-129
Identities = 526/623 (84%), Gaps = 3/623 (0%)
Strand = Plus / Plus
Query: 22 gctctggagtacactctcaagtactggctcaaatcattctccagagaccagttcaagttg 81
||||||||||||||||||||||||||||||||||| ||| || | || ||||||||| |
Sbjct: 162 gctctggagtacactctcaagtactggctcaaatccttcacccgtgaacagttcaagctt 221
Query: 82 cagggtcgcaccgtccagctctccaatttagatattaatggggatgcattgcattccagc 141
|| || | |||||| || ||||||||||||||||| | || || || ||||||||||||
Sbjct: 222 caaggccacaccgttcacctctccaatttagatatcgacggcgacgccttgcattccagc 281
Query: 142 gttggatttccgccggcgctcaatgtcgccactgcaaaagttggcaaattggagatcatg 201
|| ||||| |||||||||||||| |||||| | || | |||||||||| | ||||| | |
Sbjct: 282 gtcggattgccgccggcgctcaacgtcgcctccgccagagttggcaaactcgagataacg 341
Query: 202 ctaccatcagtgagcaatgtacagatagaaccaatcattgtgcaaattgataggctcgat 261
|| || || ||||| ||||| || | || || || ||||| |||||||||| ||||||
Sbjct: 342 cttccgtcggtgagtaatgtgcaaacggagccgattgttgtggaaattgatagactcgat 401
Query: 262 ttggttcttgaggagaattcagattttataccatctgaaagtccaaccagttct---acg 318
||||||| ||||||||||| || | | |||| ||||| || ||||||| |||
Sbjct: 402 ctggttctggaggagaattcggagtctgatgaatctccaagtcaaaacagttcttctacg 461
Query: 319 tcatcaagtgcctctgccaaaggtagcgggtatggttttgctgataagattgcagatgga 378
| || ||| | || ||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 462 ccgtcggcggccgcggctaaaggaagcggttatggttttgctgataagattgcagatggc 521
Query: 379 atgactatacagattcatacagttaatctattacttgaaactcgtggaagtgctcgtcgc 438
||||||||||| || ||||| |||||||||||||||||||| ||||| ||| ||||||||
Sbjct: 522 atgactatacaaatacatacggttaatctattacttgaaacccgtggtagttctcgtcgc 581
Query: 439 caagggggagcaacatgggcaccacccatggcatctataactatacacaaccttttgttg 498
|||||||||||| ||||||||||||| ||||||||||| ||| ||| |||||||||| ||
Sbjct: 582 caagggggagcagcatgggcaccacctatggcatctattactgtacgcaaccttttgctg 641
Query: 499 tatactacaaatgaaagctggcaggttgtaaatcttaaggaagcacgagaattctcatgt 558
||||| |||||||||| |||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 642 tataccacaaatgaaaactggcaggttgttaatcttaaggaagcacgggaattctccagt 701
Query: 559 aataagaagtatatatatgtcttcaaaaaactggaatgggaatcactgtctattgatctt 618
|| |||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||
Sbjct: 702 aacaagaagtacatatatgtcttcaaaaaattggaatggcaatctttgtctattgatctt 761
Query: 619 ttgcctcatcctgacatgttcac 641
|||||||||||||||| ||||||
Sbjct: 762 ttgcctcatcctgacacgttcac 784
>gnl|LJGI|BP052898 weakly similar to UniRef100_A7P0Z0 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 480
Score = 400 bits (202), Expect = e-110
Identities = 202/202 (100%)
Strand = Plus / Minus
Query: 3438 cgaaagcccgcgcaaatcgatggaatcaacactaactttgcttgaggaagcagttgtgga 3497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cgaaagcccgcgcaaatcgatggaatcaacactaactttgcttgaggaagcagttgtgga 421
Query: 3498 ttcacaggctaaagttgatgctttgataactgatattggcacttctgaatctacctctca 3557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttcacaggctaaagttgatgctttgataactgatattggcacttctgaatctacctctca 361
Query: 3558 gcaccttactgctgtgaaacagcttagtcagaagattgagtcgatgcagggtttaatgat 3617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gcaccttactgctgtgaaacagcttagtcagaagattgagtcgatgcagggtttaatgat 301
Query: 3618 gcaattacggaatcaactttaa 3639
||||||||||||||||||||||
Sbjct: 300 gcaattacggaatcaactttaa 279
>gnl|LJGI|TC59483 similar to UniRef100_A7P0Z0 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 818
Score = 333 bits (168), Expect = 5e-90
Identities = 416/501 (83%)
Strand = Plus / Plus
Query: 1002 tgagttccagcttgagcttttaatgcagtccctcnnnnnnnctcgggccagtcttcgtga 1061
||||||||||||||||||||| |||||||||||| |||| ||||||||| |||
Sbjct: 1 tgagttccagcttgagcttttgatgcagtccctctttttttctcgcgccagtctttctga 60
Query: 1062 aggagattctgattgtaacttgaccaggattactattgcaggactatttttgagggatac 1121
||||||| ||| ||||||||||||||||| |||| ||| || |||| ||||| ||
Sbjct: 61 aggagataatgacaagaacttgaccaggattacaattggtggattaattttaagggacac 120
Query: 1122 cttttcacggcctccatgtaccttagtgcaaccatcaatgcagtctgtcacaagagatgc 1181
|||||| | ||||||||| ||||||||||||||||| |||| |||||||| || || |
Sbjct: 121 cttttcttgccctccatgtgccttagtgcaaccatcattgcaagctgtcacaggaaatac 180
Query: 1182 ttttgaagtgccagagtttgccagaagcttttgccctccaatatatcctctaggagaaca 1241
|||| | |||||||| ||||||| ||||||||||||||||||||||||| || ||| ||
Sbjct: 181 ttttcatgtgccagaatttgccaaaagcttttgccctccaatatatcctttacaagagca 240
Query: 1242 gcagtggcaatcaatcgtgggaactccaataatatgtctccattccctgcagatcatgcc 1301
||| ||||| | | | |||||| || ||||||| |||||| | || |||| ||||||
Sbjct: 241 gcaatggcagttgactgagggaacccctctaatatgcctccatgctcttcagaccatgcc 300
Query: 1302 ctctcctcttccaccatcccttgcttctcaaacagttattgactgtcagcctcttgcgat 1361
||||| || ||||||||| ||||||||||||| ||||||||||| ||||||||| |||
Sbjct: 301 ttctccactcccaccatcctttgcttctcaaactgttattgactgccagcctcttatgat 360
Query: 1362 ccatctccaggaagaatcctgccttaggatatcatctttcttagctgatggtattgttat 1421
||||| ||||||||||| || || |||||||| ||||| ||||||||||| || ||| |
Sbjct: 361 tcatctgcaggaagaatcatgtctgaggatatcctctttgttagctgatggaatagttgt 420
Query: 1422 caatcctggtgatattttgccagatttctccgtaaaatcttttattttcactctcaaggg 1481
|| |||||||| ||||| ||||||||||| | ||||||||||||||| ||||||||||
Sbjct: 421 cagccctggtgacattttaccagatttctcattgaaatcttttattttctctctcaaggg 480
Query: 1482 actggatattacagttccttt 1502
||||||| |||| ||||||||
Sbjct: 481 actggatgttactgttccttt 501
Score = 196 bits (99), Expect = 7e-49
Identities = 255/307 (83%)
Strand = Plus / Plus
Query: 1540 gacaatacagtccagtcctcatttgctggagcaaggcttcatgttgaaaacctactcttt 1599
|||||||||| |||| |||| ||||||||||||| |||| || | |||||||| |||||
Sbjct: 512 gacaatacagcccagacctcctttgctggagcaaagcttaatatcgaaaacctgttcttt 571
Query: 1600 ttggattcaccctcaatgaagctaaggatactcaatctggagaaggatcctgcttgcttc 1659
|| || |||||| || |||| ||||| || || || || |||||||||||||||||||||
Sbjct: 572 ttagactcacccacattgaaactaagaatgctgaaccttgagaaggatcctgcttgcttc 631
Query: 1660 tgtctttgggaggatcagccaattgatgctagccagaagaaatgggctgccagtgcatcc 1719
||||||||||| | ||| || |||||||||||||||||||| ||| ||||||| ||||||
Sbjct: 632 tgtctttgggaaggtcaaccgattgatgctagccagaagaagtggactgccagagcatcc 691
Query: 1720 catcttactttatctctagaagcaagtaccggcacccttaggcatcagaattctctcgga 1779
|| |||||||| ||||| |||||| |||||| | || ||||| ||||| | |||
Sbjct: 692 cagcttactttgtctctggaagcatctaccggtatatccagacatcaaaattcccatgga 751
Query: 1780 tggactgctggaatgtggagatgtgtcgatctgaaagatgcttgcattgaagtagctatg 1839
|||||| | ||||||||||||| || ||||||||| ||||||||||||||||||||
Sbjct: 752 cagactgcacaattgtggagatgtgttgacctgaaagatacttgcattgaagtagctatg 811
Query: 1840 gtaactg 1846
| |||||
Sbjct: 812 gcaactg 818
>gnl|LJGI|FS351954 similar to UniRef100_A7P0Z0 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 817
Score = 204 bits (103), Expect = 3e-51
Identities = 304/371 (81%)
Strand = Plus / Minus
Query: 2971 gttacggttggtgtccaagggcttcagatcttgaagccccttacccaaaaagatattcct 3030
||||||||||| || |||||||| || ||| ||||||| | |||||||||||| | |||
Sbjct: 735 gttacggttggagttcaagggctacaaatcatgaagcctcatacccaaaaagacacacct 676
Query: 3031 tcatcaatgttaactgcagatgcagttaaagaatttaccaacagcgttgggggtatcaat 3090
||| ||||| || |||| ||| |||||||||||||| ||| ||||| || || |
Sbjct: 675 tcagcaatgccaattgcaaatggggttaaagaatttactgacacagttggaggaattggt 616
Query: 3091 cttgaagtgggcttggtattacatgaggataatgtcgatgatgaaaaggctaattgggag 3150
||||||| ||||| ||||| |||||| || | |||||||||| | ||||||||||
Sbjct: 615 cttgaagctcgcttgatattatgtgaggagaactttgatgatgaaatgactaattgggaa 556
Query: 3151 gtggaaaacctaaaattctctataaagcaaccgattgaggctgttgtaaccaaggatgag 3210
||||||||||||||||||||| | || || |||||||||||||||||||||| |||||||
Sbjct: 555 gtggaaaacctaaaattctctgttaaacagccgattgaggctgttgtaaccagggatgag 496
Query: 3211 gtccaatacctcacttttctgtgcaaatctgaaattgattccatgggccgtataacagct 3270
| || ||||||||| | |||||||||||||| | ||||| || ||||| ||||| |||
Sbjct: 495 cttcagcacctcacttctttgtgcaaatctgaactcgattcaattggccggataactgct 436
Query: 3271 ggaattctaagactgcttaagctagaaggttctgttggccagtctgtaatgaatcagcta 3330
|||||| || || || | ||||| |||||||||||||| ||||||||||| |||| ||
Sbjct: 435 ggaattatacgattgttgaagcttgaaggttctgttggtcagtctgtaatagatcaactc 376
Query: 3331 ggcaacctagg 3341
|||||||||||
Sbjct: 375 ggcaacctagg 365
>gnl|LJGI|TC66262 similar to UniRef100_A7P0Z0 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 669
Score = 163 bits (82), Expect = 1e-38
Identities = 166/194 (85%)
Strand = Plus / Plus
Query: 3181 ccgattgaggctgttgtaaccaaggatgaggtccaatacctcacttttctgtgcaaatct 3240
|||||||||||||||||||||| ||||||| | || ||||||||| | |||||||||||
Sbjct: 10 ccgattgaggctgttgtaaccagggatgagcttcagcacctcacttctttgtgcaaatct 69
Query: 3241 gaaattgattccatgggccgtataacagctggaattctaagactgcttaagctagaaggt 3300
||| | ||||| || ||||| ||||| ||||||||| || || || | ||||| ||||||
Sbjct: 70 gaactcgattcaattggccggataactgctggaattatacgattgttgaagcttgaaggt 129
Query: 3301 tctgttggccagtctgtaatgaatcagctaggcaacctaggaagtgaaggcatagacaag 3360
|||||||| ||||||||||| |||| || |||||||||||||| |||||||| |||| |
Sbjct: 130 tctgttggtcagtctgtaatagatcaactcggcaacctaggaagcgaaggcattgacagg 189
Query: 3361 attttctctcctga 3374
||||||||| ||||
Sbjct: 190 attttctcttctga 203