Miyakogusa Predicted Gene
- Lj3g3v1011170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1011170.1 Non Chatacterized Hit- tr|D7KC77|D7KC77_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,32.23,5e-18,seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR: pentatricopeptide
repea,CUFF.42056.1
(2511 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61609 weakly similar to UniRef100_A7P0Y7 Cluster: Chr... 1580 0.0
gnl|LJGI|TC67485 similar to UniRef100_A6ZVQ4 Cluster: Alpha-1,3-... 1068 0.0
gnl|LJGI|TC59542 weakly similar to UniRef100_Q6NQ81 Cluster: At4... 143 6e-33
gnl|LJGI|TC68036 weakly similar to UniRef100_A7P0Y7 Cluster: Chr... 86 1e-15
>gnl|LJGI|TC61609 weakly similar to UniRef100_A7P0Y7 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (55%)
Length = 1081
Score = 1580 bits (797), Expect = 0.0
Identities = 820/830 (98%)
Strand = Plus / Plus
Query: 1682 tttttatggcgcttattaatgcatatgcagcttgtggcgaatttgagaaggcaaaacagg 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttttatggcgcttattaatgcatatgcagcttgtggcgaatttgagaaggcaaaacagg 60
Query: 1742 tagttttagattcagaagtaccacacaagtacttacatgaaataaagagtgtgcttatct 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagttttagattcagaagtaccacacaagtacttacatgaaataaagagtgtgcttatct 120
Query: 1802 ccgctcttgcatcacacaagcaattgcccgaggcgcttcttatatacgaggaggtcaaga 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgctcttgcatcacacaagcaattgcccgaggcgcttcttatatacgaggaggtcaaga 180
Query: 1862 aggccggacttggtgtggagccaaaagctgttataagtctcattgaagaattgactcaat 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggccggacttggtgtggagccaaaagctgttataagtctcattgaagaattgactcaat 240
Query: 1922 taagtggagagttggatgggttgcttcttctactcaaggaattgagtgatctagactatt 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taagtggagagttggatgggttgcttcttctactcaaggaattgagtgatctagactatt 300
Query: 1982 gggttgatggttgcttcagggttatcaagtattgtgttcagaacaatcatttaagttctg 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggttgatggttgcttcagggttatcaagtattgtgttcagaacaatcatttaagttctg 360
Query: 2042 ctattgtgctgttcaaacaactcaaggataagttcgaaagtgatgaaatacaattggaag 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctattgtgctgttcaaacaactcaaggataagttcgaaagtgatgaaatacaattggaag 420
Query: 2102 ttctatttgactctgtattttctgtaattgcgtcgtccaagtccacacatctacagtttg 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttctatttgactctgtattttctgtaattgcgtcgtccaagtccacacatctacagtttg 480
Query: 2162 gcctcgacttgctttgggcaatcaaggatgagattggccttattccttcaaggcagagtc 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcctcgacttgctttgggcaatcaaggatgagattggccttattccttcaaggcagagtc 540
Query: 2222 ttgattttcttctaagtgcttgtgccaatgctggagatttgaataatgctcgtttgattt 2281
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 541 ttgattttcttctaagtgcttgtgcccatgctggagatttgaataatgctcgtttgattt 600
Query: 2282 ggagagaatatgaggttgctggatttccttacaatgtattaagttacttgaggatgtatc 2341
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 601 ggagagaatatgaggttgctggatttccttaccatgtattaagttacttgaggatgtatc 660
Query: 2342 aggcacttttagcatcaggagatcatagatctgccaaccttatgctcnnnnnnnttccaa 2401
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 661 aggcacttttagcatcaggagatcatagatctgcccaccttatgctcaaaaaaattccaa 720
Query: 2402 aagatgatatggaggtctgttctgtcatcttatcttgtcaaaacacgtactctgctaatg 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aagatgatatggaggtctgttctgtcatcttatcttgtcaaaacacgtactctgctaatg 780
Query: 2462 acaatcttaactctgtagaagtgaagaaaccgaaaggaaagaaaaagaag 2511
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 acaatcttaactctgtagaagtgaagaaaccgaaaggaaagaaaaagaag 830
>gnl|LJGI|TC67485 similar to UniRef100_A6ZVQ4 Cluster: Alpha-1,3-mannosyltransferase;
n=1; Saccharomyces cerevisiae YJM789|Rep:
Alpha-1,3-mannosyltransferase - Saccharomyces cerevisiae
(strain YJM789) (Baker's yeast), partial (3%)
Length = 764
Score = 1068 bits (539), Expect = 0.0
Identities = 546/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Plus
Query: 1 atgcgcgttcgaaaactatgcactctcagctcctatttccgttcaaatttacaccgcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 atgcgcgttcgaaaactatgcactctcagctcctatttccgttcaaatttacaccgcaaa 277
Query: 61 cccaaattcgaactcgccatttccaatatagtctcttctcctgaaccccatcacgattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cccaaattcgaactcgccatttccaatatagtctcttctcctgaaccccatcacgattcc 337
Query: 121 acttcagactttcaactctcaactctcaaactccaccgtgcttctaccccagaggattcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acttcagactttcaactctcaactctcaaactccaccgtgcttctaccccagaggattcg 397
Query: 181 tctgattcggatgttgcgacgactcagcttgcatctattatattgccttcgcctccggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tctgattcggatgttgcgacgactcagcttgcatctattatattgccttcgcctccggta 457
Query: 241 aagaagcttgtttctgaggaaaatggtaaagaagaaaaagacagaagaatactagagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aagaagcttgtttctgaggaaaatggtaaagaagaaaaagacagaagaatactagagata 517
Query: 301 ccatgggtaccggatgttcctagtggggatatttcagttaagcggaaggaggtatctcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ccatgggtaccggatgttcctagtggggatatttcagttaagcggaaggaggtatctcgt 577
Query: 361 gagaggaaacaaaaatgggtatttaaatacagtaacgaggaccgttctgacaggttactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gagaggaaacaaaaatgggtatttaaatacagtaacgaggaccgttctgacaggttactt 637
Query: 421 ggtatgtgcgcgaaaagactaggatctaaagctactgttgaggtgtttggccatctgggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ggtatgtgcgcgaaaagactaggatctaaagctactgttgaggtgtttggccatctgggt 697
Query: 481 cgggaaacaggtctgaaagagtacaataag-ttgatacaattgtgtgtaaagaaggctag 539
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 698 cgggaaacaggtctgaaagagtacaataagtttgatacaattgtgtgtaaagaaggctag 757
Query: 540 gggagct 546
|||||||
Sbjct: 758 gggagct 764
>gnl|LJGI|TC59542 weakly similar to UniRef100_Q6NQ81 Cluster: At4g04790; n=1;
Arabidopsis thaliana|Rep: At4g04790 - Arabidopsis
thaliana (Mouse-ear cress), partial (14%)
Length = 1360
Score = 143 bits (72), Expect = 6e-33
Identities = 441/564 (78%)
Strand = Plus / Plus
Query: 532 aaggctaggggagctgatgatgaagacattgctatagaagaattgagtaaggcttttcac 591
|||||||||||||||||||||||||||||||| ||||||||| || | |||| ||||||
Sbjct: 648 aaggctaggggagctgatgatgaagacattgcaatagaagaaatgggcaaggtttttcaa 707
Query: 592 cttctcaaattaatgagggaatatggtttcccactaggagagcaaacataccgcccaatt 651
||| | |||| ||||| |||| | ||||| |||| ||||||||||| |||||| ||
Sbjct: 708 ctttttaaatcaatgacggaacaaggtttaaagctagaggagcaaacatatcgcccactt 767
Query: 652 cttcagtatctaattgacttgggtatggttcgagaatttgaacttttctctgatgttatc 711
||| |||| |||||||| || ||||||| ||| ||| || |||||| ||||||||
Sbjct: 768 cttttgtatgtaattgacatgcatatggttgaagagtttcaatttttctgccatgttatc 827
Query: 712 aaagctgagaatgccagttcgacttcacggttgggttactatgaaatgatgctgtggtta 771
|||| |||||| ||||||| | || | |||||||||||||| ||||||||||||||
Sbjct: 828 aaagaagagaatcccagttctgttacaagactgggttactatgaattgatgctgtggtta 887
Query: 772 ggagttaaccatgaagaaatgatccgggatatttgtgaatatattacagttgaagacagt 831
||||||| ||||||||| ||| | || ||| | | | |||||| ||| | || ||
Sbjct: 888 agagttaataatgaagaaaagattcagggtatctataactatattgcagagaatgatggt 947
Query: 832 gaagacactactgctttacgagaaagttacttattggctctttgtgaaagtgatcgaaag 891
| ||| || || ||| |||||||| || || ||||| |||||||| ||||| || |||
Sbjct: 948 caggacccttctaatttgcgagaaagctatttgttggccctttgtgagagtgaccggaag 1007
Query: 892 acgcagattttggatgtgttgaaaaatatagacataacaaagcttacatctgtggaatct 951
| |||||||||| ||||| ||| |||||||||| ||||||| |||||| ||||||
Sbjct: 1008 gagaagattttggaactgttggaaatcatagacataaaaaagctttcatctgccgaatct 1067
Query: 952 agatcgaatatattccaagccttaggaaggctacagctggaatctgatgcagagaattta 1011
| | || ||||| || || ||||||||||||| ||||| | | ||| ||||| |
Sbjct: 1068 gtagcaaagatatttcaggcattaggaaggctactattggaaccggttgcggagaagctc 1127
Query: 1012 ctgttggatttgagagcaagcgatcaagatccggatgatatttcaaacttcattgctagt 1071
|| ||||| || | | | || || | || | ||| ||||| |||||||||||||||||
Sbjct: 1128 cttttggacttcaaaactagtaattatgaagccgataatattacaaacttcattgctagt 1187
Query: 1072 tttgctgttagcattccaaattta 1095
| ||||||||||||||||||||||
Sbjct: 1188 tatgctgttagcattccaaattta 1211
>gnl|LJGI|TC68036 weakly similar to UniRef100_A7P0Y7 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (44%)
Length = 944
Score = 85.7 bits (43), Expect = 1e-15
Identities = 166/207 (80%)
Strand = Plus / Plus
Query: 1479 catgtacaatgctataatgggaggatactttcgggagaaaaacatcagtggtgggctgag 1538
|||||||||||| ||||||| || || ||||| |||| |||||| |||| |||| ||||
Sbjct: 39 catgtacaatgccataatggcagaatgttttcgagagagaaacattagtgatggggtgag 98
Query: 1539 tgtcctcaaacatatgcgagaggccaatgtaaaacctgattcacagactttcagctattt 1598
||| | |||| |||| | || || |||||| |||||||||||||| |||| || |
Sbjct: 99 ggtctttgaacaaatgcaatgtgctgatataaaacgtgattcacagacttacagccatct 158
Query: 1599 gattaccaattgtcaaagtgaagaggatataatcaagtattatgaagaattgaagctatc 1658
|||| |||| | | ||| |||||| |||||| | ||||||||||||||| |||||| ||
Sbjct: 159 gatttccaactctgaaactgaagaagatatagtaaagtattatgaagaactgaagcattc 218
Query: 1659 aggaatccaagctacaaagcaaatttt 1685
||||| ||||||||||||||||||
Sbjct: 219 tggaatgagagctacaaagcaaatttt 245