Miyakogusa Predicted Gene

Lj3g3v1011040.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1011040.1 Non Chatacterized Hit- tr|I1N178|I1N178_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39858 PE,77.14,0.000009,
,CUFF.41993.1
         (120 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61910 similar to UniRef100_A7NW95 Cluster: Chromosome...   149   4e-36
gnl|LJGI|TC77260 weakly similar to UniRef100_A7Q2T5 Cluster: Chr...   127   2e-29

>gnl|LJGI|TC61910 similar to UniRef100_A7NW95 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 1049

 Score =  149 bits (75), Expect = 4e-36
 Identities = 87/91 (95%)
 Strand = Plus / Minus

                                                                       
Query: 6   aagaagtgcaattgatccttccttgcagggaagttatgcgtatgaatcaatgagacctgc 65
           |||||||| |||||||||||| ||||||||||||||| | ||||||||||||||||||||
Sbjct: 584 aagaagtgaaattgatccttcattgcagggaagttatacatatgaatcaatgagacctgc 525

                                          
Query: 66  agttcagattaccagcatctatctctcgaag 96
           |||||||||||||||||||||||||||||||
Sbjct: 524 agttcagattaccagcatctatctctcgaag 494


>gnl|LJGI|TC77260 weakly similar to UniRef100_A7Q2T5 Cluster: Chromosome chr1
           scaffold_46, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 614

 Score =  127 bits (64), Expect = 2e-29
 Identities = 104/116 (89%), Gaps = 1/116 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   aagaagtgcaattgatccttccttgcagggaagttatgcgtatgaatcaatgagacctgc 65
           |||||||||||||||||||||| ||  |||||||||||| ||||||||||||||  ||||
Sbjct: 299 aagaagtgcaattgatccttccctgaggggaagttatgcatatgaatcaatgaggactgc 358

                                                                   
Query: 66  agttcagattaccagcatctatctctcgaaggtttctagtaagcg-ccttcaatag 120
           |||||||||||||| || || |||||| |||||| |||||||||| ||||||||||
Sbjct: 359 agttcagattaccatcaactgtctctccaaggttcctagtaagcgcccttcaatag 414