Miyakogusa Predicted Gene

Lj3g3v1011010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1011010.1 tr|G7JFG9|G7JFG9_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_4g130200 PE=4
SV=1,61.96,3e-19,FBD,FBD,CUFF.41991.1
         (282 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP036975                                                     379   e-105

>gnl|LJGI|BP036975 
          Length = 528

 Score =  379 bits (191), Expect = e-105
 Identities = 257/279 (92%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggacattctccaaaagacacctaaattggaagttcttcatattccaatgggatttgac 60
           ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 443 atggaaattctccaaaagacacctaaattggaagttcttcatattcctatgggatttgac 384

                                                                       
Query: 61  ccacagatctgcatggatggtgaagacgggatattgaactcagttccttgttgtttcaaa 120
           |||||||||||| |||||||||| ||| |||  ||||||||||| |||||||||||||||
Sbjct: 383 ccacagatctgcttggatggtgaggactggaggttgaactcagtaccttgttgtttcaaa 324

                                                                       
Query: 121 tatagtctcaaatcattttctatttcatattttgatgggggtgaagctgaaatccagttg 180
           ||||||||||||| ||| ||||||||| ||||||||||| |||||||||| || ||||||
Sbjct: 323 tatagtctcaaattattctctatttcaaattttgatgggagtgaagctgacattcagttg 264

                                                                       
Query: 181 ctgaagtttttgttagaaaatgctacagttttagaggagatccggatattctgttcgaaa 240
           |||| ||||||||||||||| || | |||||||| ||||||||||||||||||||| |||
Sbjct: 263 ctgaggtttttgttagaaaacgccagagttttaggggagatccggatattctgttctaaa 204

                                                  
Query: 241 actttatcttctaatttgaagaagcaggctgagatcagc 279
           ||||||||| || ||||||||||||||||||||||||||
Sbjct: 203 actttatctgctgatttgaagaagcaggctgagatcagc 165