Miyakogusa Predicted Gene
- Lj3g3v1010950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1010950.1 tr|F4J721|F4J721_ARATH F-box/LRR-repeat protein
OS=Arabidopsis thaliana GN=At3g58900 PE=4 SV=1,29.41,2e-18,F-box
domain,F-box domain, cyclin-like; FAMILY NOT NAMED,NULL;
LRR_2,Leucine-rich repeat 2; F-box,F-,CUFF.42182.1
(1009 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57924 similar to UniRef100_A7QK60 Cluster: Chromosome... 1515 0.0
gnl|LJGI|BW599237 396 e-109
>gnl|LJGI|TC57924 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_111, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 811
Score = 1515 bits (764), Expect = 0.0
Identities = 764/764 (100%)
Strand = Plus / Plus
Query: 1 atggctggtttaatctcatcatcacctgatacacataagctccaaagaagtaatgtgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atggctggtttaatctcatcatcacctgatacacataagctccaaagaagtaatgtgggt 107
Query: 61 gaaatgaaggatatgatcagcaacttacctgatagccttcttcattacattctttctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gaaatgaaggatatgatcagcaacttacctgatagccttcttcattacattctttctttg 167
Query: 121 gtccctaccaaagatgctatacgaacttccattttggctaaaaggtggaagtacttgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gtccctaccaaagatgctatacgaacttccattttggctaaaaggtggaagtacttgtgg 227
Query: 181 acctgcttatctgtctttgattttgaaaaggatcggtcatttatctgcatgaaagaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 acctgcttatctgtctttgattttgaaaaggatcggtcatttatctgcatgaaagaagac 287
Query: 241 caaagacagaaatctctatattgcctcttagatcaagtgcacagactactttatcattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 caaagacagaaatctctatattgcctcttagatcaagtgcacagactactttatcattct 347
Query: 301 aattgtgtgaaaaagctccgtgtcaattactttggagttgccattgatgcagatcgagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aattgtgtgaaaaagctccgtgtcaattactttggagttgccattgatgcagatcgagtt 407
Query: 361 aattctcttatttctgctgcagtgaagcacaaaatcgaagagcttaagctttacatactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aattctcttatttctgctgcagtgaagcacaaaatcgaagagcttaagctttacatactt 467
Query: 421 ctaaaggctcagtttgtgttacctcattgtctctcagcttttgaatcattgaataagctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ctaaaggctcagtttgtgttacctcattgtctctcagcttttgaatcattgaataagctg 527
Query: 481 gttttagaactgggttgtgctctaaatgttcctagtggcattcacttccctggcctgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gttttagaactgggttgtgctctaaatgttcctagtggcattcacttccctggcctgaag 587
Query: 541 agattaaagctttcgtgtgttaactttgcaaatgagaagtcagttcaacatcttttctct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agattaaagctttcgtgtgttaactttgcaaatgagaagtcagttcaacatcttttctct 647
Query: 601 ggctgccctgtcctacagaagttaaccttgttcaattgtaattggtggaacatcaagcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ggctgccctgtcctacagaagttaaccttgttcaattgtaattggtggaacatcaagcag 707
Query: 661 gtcggcattacaattcccacattaaagacattaaccatcttttgcgaccgttctgatcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gtcggcattacaattcccacattaaagacattaaccatcttttgcgaccgttctgatcga 767
Query: 721 gaggatttgctcaattctaaagtcaagattgaagctgtgaatct 764
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gaggatttgctcaattctaaagtcaagattgaagctgtgaatct 811
>gnl|LJGI|BW599237
Length = 471
Score = 396 bits (200), Expect = e-109
Identities = 228/236 (96%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 211 gatcggtcattta-tctgcatgaaagaagaccaaagacagaaatctctatattgcctctt 269
||||||||||||| |||||||||||||||||||||||||||| || ||||||||||
Sbjct: 236 gatcggtcatttaatctgcatgaaagaagaccaaagacagaagtcgggggattgcctctt 295
Query: 270 agatcaagtgcacagactactttatcattctaattgtgtgaaaaagctccgtgtcaatta 329
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atatcaagtgcacagactactttatcattctaattgtgtgaaaaagctccgtgtcaatta 355
Query: 330 ctttggagttgccattgatgcagatcgagttaattctcttatttctgctgcagtgaagca 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctttggagttgccattgatgcagatcgagttaattctcttatttctgctgcagtgaagca 415
Query: 390 caaaatcgaagagcttaagctttacatacttctaaaggctcagtttgtgttacctc 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 caaaatcgaagagcttaagctttacatacttctaaaggctcagtttgtgttacctc 471