Miyakogusa Predicted Gene
- Lj3g3v1010910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1010910.1 Non Chatacterized Hit- tr|I3T7H3|I3T7H3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,99.14,0,no
description,NULL; SUI1_MOF2: translation initiation factor
SUI1,Eukaryotic translation initiation,CUFF.42173.1
(351 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60977 696 0.0
gnl|LJGI|FS337734 homologue to UniRef100_O48650 Cluster: Protein... 315 1e-85
gnl|LJGI|TC63862 homologue to UniRef100_O48650 Cluster: Protein ... 315 1e-85
gnl|LJGI|BI418765 homologue to UniRef100_O48650 Cluster: Protein... 252 1e-66
gnl|LJGI|FS345320 similar to UniRef100_A7P0Q4 Cluster: Chromosom... 101 3e-21
gnl|LJGI|TC66285 similar to UniRef100_A7P0Q4 Cluster: Chromosome... 101 3e-21
gnl|LJGI|TC67552 similar to UniRef100_A7P0Q4 Cluster: Chromosome... 56 1e-07
>gnl|LJGI|TC60977
Length = 795
Score = 696 bits (351), Expect = 0.0
Identities = 351/351 (100%)
Strand = Plus / Plus
Query: 1 atgtctgaattagacgctcagattcctactgccttcgatccttttgctgaggcaaatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atgtctgaattagacgctcagattcctactgccttcgatccttttgctgaggcaaatgtt 244
Query: 61 gacgagtcgggtgctgggggtgctgggacaaaggactatgtgcatatccgcgtgcagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gacgagtcgggtgctgggggtgctgggacaaaggactatgtgcatatccgcgtgcagcag 304
Query: 121 aggaatggcaggaaaagcctgacaactgttcagggattgaagaaagaattcagctataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aggaatggcaggaaaagcctgacaactgttcagggattgaagaaagaattcagctataac 364
Query: 181 aagatactgaaggaccttaagaaagagttctgttgcaatggtacagttgttcaggaccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aagatactgaaggaccttaagaaagagttctgttgcaatggtacagttgttcaggaccca 424
Query: 241 gaacttggacaggttatccaacttcaaggtgatcagcggaagaatgtttctaccttccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaacttggacaggttatccaacttcaaggtgatcagcggaagaatgtttctaccttccta 484
Query: 301 gtccaggctggtatcgtgaagaaggataatatcaagattcatggtttctga 351
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtccaggctggtatcgtgaagaaggataatatcaagattcatggtttctga 535
>gnl|LJGI|FS337734 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 702
Score = 315 bits (159), Expect = 1e-85
Identities = 304/351 (86%), Gaps = 6/351 (1%)
Strand = Plus / Plus
Query: 1 atgtctgaattagacgctcagattcctactgccttcgatccttttgctgaggcaaatgtt 60
||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| |
Sbjct: 64 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 123
Query: 61 gacgagtcgggtgctgggggtgctgggacaaaggactatgtgcatatccgcgtgcagcag 120
|| || || ||||||||| | | ||||||| || |||||||| || | || |||
Sbjct: 124 gaggactctggtgctggg--tcat----caaaggagtacgtgcatattcgtatacaacag 177
Query: 121 aggaatggcaggaaaagcctgacaactgttcagggattgaagaaagaattcagctataac 180
||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||||
Sbjct: 178 cggaatggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataac 237
Query: 181 aagatactgaaggaccttaagaaagagttctgttgcaatggtacagttgttcaggaccca 240
||||| || || ||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 238 aagattcttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatcca 297
Query: 241 gaacttggacaggttatccaacttcaaggtgatcagcggaagaatgtttctaccttccta 300
||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 298 gaactaggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttccta 357
Query: 301 gtccaggctggtatcgtgaagaaggataatatcaagattcatggtttctga 351
|||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 358 gtccaggctggtatcgtgaagaaggagcatattaagattcatggtttctga 408
>gnl|LJGI|TC63862 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 731
Score = 315 bits (159), Expect = 1e-85
Identities = 304/351 (86%), Gaps = 6/351 (1%)
Strand = Plus / Plus
Query: 1 atgtctgaattagacgctcagattcctactgccttcgatccttttgctgaggcaaatgtt 60
||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| |
Sbjct: 203 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 262
Query: 61 gacgagtcgggtgctgggggtgctgggacaaaggactatgtgcatatccgcgtgcagcag 120
|| || || ||||||||| | | ||||||| || |||||||| || | || |||
Sbjct: 263 gaggactctggtgctggg--tcat----caaaggagtacgtgcatattcgtatacaacag 316
Query: 121 aggaatggcaggaaaagcctgacaactgttcagggattgaagaaagaattcagctataac 180
||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||||
Sbjct: 317 cggaatggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataac 376
Query: 181 aagatactgaaggaccttaagaaagagttctgttgcaatggtacagttgttcaggaccca 240
||||| || || ||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 377 aagattcttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatcca 436
Query: 241 gaacttggacaggttatccaacttcaaggtgatcagcggaagaatgtttctaccttccta 300
||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 437 gaactaggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttccta 496
Query: 301 gtccaggctggtatcgtgaagaaggataatatcaagattcatggtttctga 351
|||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 497 gtccaggctggtatcgtgaagaaggagcatattaagattcatggtttctga 547
>gnl|LJGI|BI418765 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 544
Score = 252 bits (127), Expect = 1e-66
Identities = 263/307 (85%), Gaps = 6/307 (1%)
Strand = Plus / Plus
Query: 1 atgtctgaattagacgctcagattcctactgccttcgatccttttgctgaggcaaatgtt 60
||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| |
Sbjct: 140 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 199
Query: 61 gacgagtcgggtgctgggggtgctgggacaaaggactatgtgcatatccgcgtgcagcag 120
|| || || ||||||||| | | ||||||| || |||||||| || | || |||
Sbjct: 200 gaggactctggtgctggg--tcat----caaaggagtacgtgcatattcgtatacaacag 253
Query: 121 aggaatggcaggaaaagcctgacaactgttcagggattgaagaaagaattcagctataac 180
||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||||
Sbjct: 254 cggaatggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataac 313
Query: 181 aagatactgaaggaccttaagaaagagttctgttgcaatggtacagttgttcaggaccca 240
||||| || || ||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 314 aagattcttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatcca 373
Query: 241 gaacttggacaggttatccaacttcaaggtgatcagcggaagaatgtttctaccttccta 300
||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 374 gaactaggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttccta 433
Query: 301 gtccagg 307
|||||||
Sbjct: 434 gtccagg 440
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 304 caggctggtatcgtgaagaaggataatatcaagattcatggtttctga 351
||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 491 caggctggtatcgtgaagaaggagcatattaagattcatggtttctga 538
>gnl|LJGI|FS345320 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 709
Score = 101 bits (51), Expect = 3e-21
Identities = 204/255 (80%)
Strand = Plus / Minus
Query: 97 tatgtgcatatccgcgtgcagcagaggaatggcaggaaaagcctgacaactgttcaggga 156
||||| ||| ||||| | |||||||||||||| | ||| ||| |||| || || |||||
Sbjct: 535 tatgtacatgtccgcatacagcagaggaatgggaagaagagcttgaccacagtgcagggg 476
Query: 157 ttgaagaaagaattcagctataacaagatactgaaggaccttaagaaagagttctgttgc 216
||||||| || ||||||||| | ||||| || |||||||| ||||| |||||||| |||
Sbjct: 475 ctgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgc 416
Query: 217 aatggtacagttgttcaggacccagaacttggacaggttatccaacttcaaggtgatcag 276
|| || | || || || ||| ||||| || || ||||||| || ||||||||||||
Sbjct: 415 aacgggaacgtagtgcatgacaaggaactcggcaagattatccagctccaaggtgatcag 356
Query: 277 cggaagaatgtttctaccttcctagtccaggctggtatcgtgaagaaggataatatcaag 336
|| |||||||||||| |||||| || |||||||| | || |||||||| ||||||
Sbjct: 355 cgcaagaatgtttctcacttccttgttcaggctggacttgttaagaaggaccgcatcaag 296
Query: 337 attcatggtttctga 351
|||||||||||||||
Sbjct: 295 attcatggtttctga 281
>gnl|LJGI|TC66285 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 649
Score = 101 bits (51), Expect = 3e-21
Identities = 204/255 (80%)
Strand = Plus / Plus
Query: 97 tatgtgcatatccgcgtgcagcagaggaatggcaggaaaagcctgacaactgttcaggga 156
||||| ||| ||||| | |||||||||||||| | ||| ||| |||| || || |||||
Sbjct: 140 tatgtacatgtccgcatacagcagaggaatgggaagaagagcttgaccacagtgcagggg 199
Query: 157 ttgaagaaagaattcagctataacaagatactgaaggaccttaagaaagagttctgttgc 216
||||||| || ||||||||| | ||||| || |||||||| ||||| |||||||| |||
Sbjct: 200 ctgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgc 259
Query: 217 aatggtacagttgttcaggacccagaacttggacaggttatccaacttcaaggtgatcag 276
|| || | || || || ||| ||||| || || ||||||| || ||||||||||||
Sbjct: 260 aacgggaacgtagtgcatgacaaggaactcggcaagattatccagctccaaggtgatcag 319
Query: 277 cggaagaatgtttctaccttcctagtccaggctggtatcgtgaagaaggataatatcaag 336
|| |||||||||||| |||||| || |||||||| | || |||||||| ||||||
Sbjct: 320 cgcaagaatgtttctcacttccttgttcaggctggacttgttaagaaggaccgcatcaag 379
Query: 337 attcatggtttctga 351
|||||||||||||||
Sbjct: 380 attcatggtttctga 394
>gnl|LJGI|TC67552 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 565
Score = 56.0 bits (28), Expect = 1e-07
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 91 aaggactatgtgcatatccgcgtgcagcagaggaatggcaggaaaagcctgacaactgtt 150
||||| ||||||||||| ||| | ||||| |||||||| | ||||||| |||| || ||
Sbjct: 167 aaggagtatgtgcatatacgcattcagcaaaggaatggaaagaaaagcttgaccacagtg 226
Query: 151 cagggattgaagaaagaattcagctataacaagatactgaaggaccttaagaaagagttc 210
|| || ||||||| || |||||||| | ||||| || ||||| |||||||| |||||
Sbjct: 227 caagggctgaagaaggagttcagctacgagaagatcctcaaggatcttaagaaggagttt 286
Query: 211 tgttgcaa 218
|| |||||
Sbjct: 287 tgctgcaa 294