Miyakogusa Predicted Gene
- Lj3g3v0988820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0988820.1 tr|I1KU76|I1KU76_SOYBN Translation initiation
factor IF-2 OS=Glycine max PE=3 SV=1,83.12,0,IF2,Translation
initiation factor aIF-2, bacterial-like; coiled-coil,NULL; P-loop
containing nucleos,CUFF.41976.1
(3030 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67558 similar to UniRef100_P57997 Cluster: Translatio... 811 0.0
gnl|LJGI|AV410531 similar to UniRef100_P57997 Cluster: Translati... 755 0.0
gnl|LJGI|AV769010 homologue to UniRef100_P57997 Cluster: Transla... 700 0.0
gnl|LJGI|TC75766 similar to UniRef100_Q9ASQ3 Cluster: Translatio... 218 2e-55
>gnl|LJGI|TC67558 similar to UniRef100_P57997 Cluster: Translation initiation factor
IF-2, chloroplast precursor; n=1; Phaseolus
vulgaris|Rep: Translation initiation factor IF-2,
chloroplast precursor - Phaseolus vulgaris (Kidney bean)
(French bean), partial (12%)
Length = 661
Score = 811 bits (409), Expect = 0.0
Identities = 430/438 (98%), Gaps = 1/438 (0%)
Strand = Plus / Plus
Query: 1 atgcttatattggtggggaacgtgcaaggaacaatgagttctcttgcttccccagtgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atgcttatattggtggggaacgtgcaaggaacaatgagttctcttgcttccccagtgagt 284
Query: 61 ttggggagtcttacaggggtgagttcctctgggaggtctcattctgttgtgaggagagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ttggggagtcttacaggggtgagttcctctgggaggtctcattctgttgtgaggagagtc 344
Query: 121 tctctttctagagggaactgtaagaagaacaagaaatggcattgtgtgtccttttctatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tctctttctagagggaactgtaagaagaacaagaaatggcattgtgtgtccttttctatc 404
Query: 181 tgtagatattcagtcaccacaactgattttattgctgaccaaggcaattcagtgtccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgtagatattcagtcaccacaactgattttattgctgaccaaggcaattcagtgtccctt 464
Query: 241 gattctagtagtgatagtaaaggtggagatagtagtgctggttttgtccttaagcctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gattctagtagtgatagtaaaggtggagatagtagtgctggttttgtccttaagcctcct 524
Query: 301 cctaagcctgtgttgaagtccccgggcgataagggggaccccattttaggctcaggttct 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 525 cctaagcctgtgttgaagtccccgggcgataagggggacccca-tttaggctcaggttct 583
Query: 361 tnnnnnnnttcaaggaaaactgaggactcggatgatgtcgaagagaggaataaagtgatt 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tgggggggttcaaggaaaactgaggactcggatgatgtcgaagagaggaataaagtgatt 643
Query: 421 gaatcgcttggagaggta 438
||||||||||||||||||
Sbjct: 644 gaatcgcttggagaggta 661
>gnl|LJGI|AV410531 similar to UniRef100_P57997 Cluster: Translation initiation factor
IF-2, chloroplast precursor; n=1; Phaseolus vulgaris|Rep:
Translation initiation factor IF-2, chloroplast precursor
- Phaseolus vulgaris (Kidney bean) (French bean), partial
(12%)
Length = 402
Score = 755 bits (381), Expect = 0.0
Identities = 395/402 (98%)
Strand = Plus / Plus
Query: 699 agaggagaaggttacaccgcagtctcgtgctcctcagcctccttcaaaacctcaaccaat 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggagaaggttacaccgcagtctcgtgctcctcagcctccttcaaaacctcaaccaat 60
Query: 759 gttacaatcgaagccttctatagctcccccacccatnnnnnnncctgttgtgttgaagga 818
|||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 gttacaatcgaagccttctatagctcccccacccataaaaaaacctgttgtgttgaagga 120
Query: 819 taagggggaagctgaaccaactgttaaatcaaaagaaaggaagcccatcttgattgataa 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagggggaagctgaaccaactgttaaatcaaaagaaaggaagcccatcttgattgataa 180
Query: 879 gttcgcatccaagaaaccagcagttgatccttcaattgctcaagcagttctggcccctcc 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcgcatccaagaaaccagcagttgatccttcaattgctcaagcagttctggcccctcc 240
Query: 939 aaaaccagggaaggctcctcccccaggaaagtttaaagatgattaccggaggaaaggtgc 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaaccagggaaggctcctcccccaggaaagtttaaagatgattaccggaggaaaggtgc 300
Query: 999 tcccactgggggaggaccaagaagacgactagtagctgatgatatgattgctgatgagga 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcccactgggggaggaccaagaagacgactagtagctgatgatatgattgctgatgagga 360
Query: 1059 cacatcagaactcaatgtctctattcctggtaaaacaagaaa 1100
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacatcagaactcaatgtctctattcctggtaaaacaagaaa 402
>gnl|LJGI|AV769010 homologue to UniRef100_P57997 Cluster: Translation initiation factor
IF-2, chloroplast precursor; n=1; Phaseolus vulgaris|Rep:
Translation initiation factor IF-2, chloroplast precursor
- Phaseolus vulgaris (Kidney bean) (French bean), partial
(12%)
Length = 369
Score = 700 bits (353), Expect = 0.0
Identities = 365/369 (98%)
Strand = Plus / Plus
Query: 1259 gtattctatacgctaaggggattaaaccagatggggtacaaactctagacaaagatatgg 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtattctatacgctaaggggattaaaccagatggggtacaaactctagacaaagatatgg 60
Query: 1319 tgaggatgatttgtaatgagtacgatgttgaagttatagatgctgatcctgtcaaagttg 1378
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaggatgatttgttatgagtacgatgttgaagttatagatgctgatcctgtcaaagttg 120
Query: 1379 aaggattaatgaagaaaagagacattcttgatgaaggtgaccttgacaaactcaaagata 1438
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 aaggattaatgaagaagagagacattcttgatgaaggtgaccttgacaaactcatagata 180
Query: 1439 ggcctcctgtcattactattatgggccatgtagatcatggcaagacaacacttttggatt 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcctcctgtcattactattatgggccatgtagatcatggcaagacaacacttttggatt 240
Query: 1499 atatacggaagagcaaggtagttgcttcagaagctggtgggatcacacagggaattgggg 1558
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atatacggaagagcaaggttgttgcttcagaagctggtgggatcacacagggaattgggg 300
Query: 1559 cttataaagtgcaagtacctattgatggtaaaccattgccttgtgttttccttgacactc 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttataaagtgcaagtacctattgatggtaaaccattgccttgtgttttccttgacactc 360
Query: 1619 ctgggcatg 1627
|||||||||
Sbjct: 361 ctgggcatg 369
>gnl|LJGI|TC75766 similar to UniRef100_Q9ASQ3 Cluster: Translation initiation factor
IF-2; n=1; Arabidopsis thaliana|Rep: Translation
initiation factor IF-2 - Arabidopsis thaliana (Mouse-ear
cress), partial (3%)
Length = 643
Score = 218 bits (110), Expect = 2e-55
Identities = 112/113 (99%)
Strand = Plus / Minus
Query: 2918 aagagggagattttgttgaagccttcaacacagttcagaagaagaggacccttgaagagg 2977
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 632 aagagggagattttgttgaagccttcaacacngttcagaagaagaggacccttgaagagg 573
Query: 2978 cctcagcatcaatggcagctgctgtggagggagtaggagttaaactatagaat 3030
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cctcagcatcaatggcagctgctgtggagggagtaggagttaaactatagaat 520