Miyakogusa Predicted Gene

Lj3g3v0978810.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0978810.2 Non Chatacterized Hit- tr|I1MJ44|I1MJ44_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21361
PE,78.33,0,seg,NULL; zf-C3HC,Zinc finger, C3HC-like; ZINC ION
BINDING,NULL; FAMILY NOT NAMED,NULL,CUFF.41968.2
         (2886 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW618239 similar to UniRef100_A7Q178 Cluster: Chromosom...   474   e-132
gnl|LJGI|TC74434 similar to UniRef100_A7Q178 Cluster: Chromosome...    56   1e-06

>gnl|LJGI|BW618239 similar to UniRef100_A7Q178 Cluster: Chromosome chr10 scaffold_43,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_43, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (3%)
          Length = 475

 Score =  474 bits (239), Expect = e-132
 Identities = 239/239 (100%)
 Strand = Plus / Plus

                                                                       
Query: 143 gctctgccggtgcatcgtcgccggcgatcgccactaacggccgcgacaaatcgagcgcag 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gctctgccggtgcatcgtcgccggcgatcgccactaacggccgcgacaaatcgagcgcag 296

                                                                       
Query: 203 attcacacatggtggcttcgaattcgaatccttcctgtcggccctgggaacgatgtgatt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 attcacacatggtggcttcgaattcgaatccttcctgtcggccctgggaacgatgtgatt 356

                                                                       
Query: 263 tgctccgccgcctttccaccttcaagctcgccggaaaaattcccaaggttgctggctcat 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgctccgccgcctttccaccttcaagctcgccggaaaaattcccaaggttgctggctcat 416

                                                                      
Query: 323 tggcctgtgccaagagaggttgggtgagtgttgatgttactaagattgagtgtgagtta 381
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tggcctgtgccaagagaggttgggtgagtgttgatgttactaagattgagtgtgagtta 475



 Score =  161 bits (81), Expect = 3e-38
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgtcacttctgcaattcccaaaccactctctcctcccactcctgctgccaggtccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  atggtgtcacttctgcaattcccaaaccactctctcctcccactcctgctgccaggtccc 154

                                
Query: 61  aatcccattctctctctaggg 81
           |||||||||||||||||||||
Sbjct: 155 aatcccattctctctctaggg 175


>gnl|LJGI|TC74434 similar to UniRef100_A7Q178 Cluster: Chromosome chr10 scaffold_43,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr10 scaffold_43, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (20%)
          Length = 645

 Score = 56.0 bits (28), Expect = 1e-06
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2016 tagttttggtattagtggaggaagtgttggcatgtgtgcaagtcatgaggctgaaatcca 2075
            |||||||||  |||||||||| ||||| || ||||||   |||||||| |||||||||||
Sbjct: 443  tagttttggcgttagtggagggagtgtaggaatgtgtcttagtcatgaagctgaaatcca 502

                
Query: 2076 tggg 2079
            ||||
Sbjct: 503  tggg 506