Miyakogusa Predicted Gene
- Lj3g3v0977780.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0977780.3 Non Chatacterized Hit- tr|J3L2M7|J3L2M7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,65.38,3e-19,seg,NULL; Endosulfine,Endosulphine,CUFF.42061.3
(237 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62284 homologue to UniRef100_A8MS32 Cluster: Uncharac... 470 e-132
gnl|LJGI|TC74645 similar to UniRef100_Q0DFW5 Cluster: Os05g05666... 62 2e-09
gnl|LJGI|TC60710 similar to UniRef100_Q0DFW5 Cluster: Os05g05666... 62 2e-09
>gnl|LJGI|TC62284 homologue to UniRef100_A8MS32 Cluster: Uncharacterized protein
At5g64130.3; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At5g64130.3 - Arabidopsis
thaliana (Mouse-ear cress), partial (56%)
Length = 716
Score = 470 bits (237), Expect = e-132
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 atgatgcccaaaaaaccaccactcatatctaaggaccatgagcgtgcatacttcgattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgatgcccaaaaaaccaccactcatatctaaggaccatgagcgtgcatacttcgattct 320
Query: 61 gctgattgggcactgggaaagcaaggcggtggcaagcccaagggaccacttgaggctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgattgggcactgggaaagcaaggcggtggcaagcccaagggaccacttgaggctctt 380
Query: 121 cggcctaaattacagccaacacagcagcaaacacgataccggaaatctccttatgctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggcctaaattacagccaacacagcagcaaacacgataccggaaatctccttatgctcct 440
Query: 181 tctggagaagaagggggaagtgttccatctgaggatgcaacttccaatgagtaagca 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggagaagaagggggaagtgttccatctgaggatgcaacttccaatgagtaagca 497
>gnl|LJGI|TC74645 similar to UniRef100_Q0DFW5 Cluster: Os05g0566600 protein; n=2;
Oryza sativa Japonica Group|Rep: Os05g0566600 protein -
Oryza sativa subsp. japonica (Rice), partial (71%)
Length = 732
Score = 61.9 bits (31), Expect = 2e-09
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 19 ccactcatatctaaggaccatgagcgtgcatacttcgattctgctgattgggcactggga 78
||||| ||||||||||| ||||| ||||| || || ||||||||||||||||| | ||
Sbjct: 270 ccactaatatctaaggatcatgaacgtgcttattttgattctgctgattgggctttaggg 329
Query: 79 aagcaaggcggtggcaagcccaagggaccacttgaggctcttcggcctaaattacagcca 138
|||||||| | ||||| || ||||||||||| || ||||| || || || ||||||
Sbjct: 330 aagcaaggagcaaataagcctaaaggaccacttgaagcacttcgcccgaagttgcagcca 389
Query: 139 acacagcagca 149
||||| |||||
Sbjct: 390 acacaccagca 400
>gnl|LJGI|TC60710 similar to UniRef100_Q0DFW5 Cluster: Os05g0566600 protein; n=2;
Oryza sativa Japonica Group|Rep: Os05g0566600 protein -
Oryza sativa subsp. japonica (Rice), partial (71%)
Length = 753
Score = 61.9 bits (31), Expect = 2e-09
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 19 ccactcatatctaaggaccatgagcgtgcatacttcgattctgctgattgggcactggga 78
||||| ||||||||||| ||||| ||||| || || ||||||||||||||||| | ||
Sbjct: 233 ccactaatatctaaggatcatgaacgtgcttattttgattctgctgattgggctttaggg 292
Query: 79 aagcaaggcggtggcaagcccaagggaccacttgaggctcttcggcctaaattacagcca 138
|||||||| | ||||| || ||||||||||| || ||||| || || || ||||||
Sbjct: 293 aagcaaggagcaaataagcctaaaggaccacttgaagcacttcgcccgaagttgcagcca 352
Query: 139 acacagcagca 149
||||| |||||
Sbjct: 353 acacaccagca 363