Miyakogusa Predicted Gene

Lj3g3v0966720.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0966720.1 CUFF.41961.1
         (304 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68269 similar to UniRef100_Q7ZYY1 Cluster: Peptidyl-p...   196   5e-50
gnl|LJGI|TC79424 weakly similar to UniRef100_Q8SX98 Cluster: GH2...   127   4e-29

>gnl|LJGI|TC68269 similar to UniRef100_Q7ZYY1 Cluster: Peptidyl-prolyl cis-trans
           isomerase; n=1; Danio rerio|Rep: Peptidyl-prolyl
           cis-trans isomerase - Danio rerio (Zebrafish)
           (Brachydanio rerio), partial (4%)
          Length = 930

 Score =  196 bits (99), Expect = 5e-50
 Identities = 105/107 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcccagaccataccttctgtccctcccagaagataaaatccccaatcaacacccaacc 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgcccagaccgtaccttctgtccctcccagaagataaaatccccaatcaacacccaacc 601

                                                          
Query: 61  aacctgcaacctcctccctctcccacccacctgcaaccgccaccctt 107
           |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 602 aacctgcaacctcctccctctcccacccacctacaaccgccaccctt 648



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 42  ccccaatcaacacccaaccaacctgcaacctc 73
           |||||||||||||||||||||| |||||||||
Sbjct: 662 ccccaatcaacacccaaccaacatgcaacctc 693


>gnl|LJGI|TC79424 weakly similar to UniRef100_Q8SX98 Cluster: GH25793p; n=1;
           Drosophila melanogaster|Rep: GH25793p - Drosophila
           melanogaster (Fruit fly), partial (3%)
          Length = 629

 Score =  127 bits (64), Expect = 4e-29
 Identities = 70/72 (97%)
 Strand = Plus / Plus

                                                                       
Query: 35  ataaaatccccaatcaacacccaaccaacctgcaacctcctccctctcccacccacctgc 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39  ataaaatccccaatcaacacccaaccaacctgcaacctcctccctctcccacccacctgc 98

                       
Query: 95  aaccgccaccct 106
           || | |||||||
Sbjct: 99  aatcaccaccct 110