Miyakogusa Predicted Gene

Lj3g3v0966220.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0966220.1 Non Chatacterized Hit- tr|I1JE63|I1JE63_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6055
PE=,64.37,1e-18,seg,NULL; Endosulfine,Endosulphine,CUFF.41933.1
         (240 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74645 similar to UniRef100_Q0DFW5 Cluster: Os05g05666...   383   e-106
gnl|LJGI|TC60710 similar to UniRef100_Q0DFW5 Cluster: Os05g05666...   383   e-106
gnl|LJGI|TC62284 homologue to UniRef100_A8MS32 Cluster: Uncharac...    66   1e-10

>gnl|LJGI|TC74645 similar to UniRef100_Q0DFW5 Cluster: Os05g0566600 protein; n=2;
           Oryza sativa Japonica Group|Rep: Os05g0566600 protein -
           Oryza sativa subsp. japonica (Rice), partial (71%)
          Length = 732

 Score =  383 bits (193), Expect = e-106
 Identities = 226/237 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagaggctaaagatgttgtggatttgaagaattcccctgaaggtgaagctatctct 60
           |||||||||||||||||||||| ||||||||||||||| ||||||||||| | || ||| 
Sbjct: 84  atgtcagaggctaaagatgttgaggatttgaagaattctcctgaaggtgacgttaactcc 143

                                                                       
Query: 61  catgattctggggatgatccgaaagaatcagataaagatcaaaatgatgaaagccccatg 120
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 144 catgattctggggatgatctcaaagaatcagataaagatcaaaatgatgaaagccccatg 203

                                                                       
Query: 121 ccctcacctcagcaggaggaagaagctgtgatgaagaagtatggagggatgttgccaaag 180
           || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 ccttcacctcagcaggaggaagaagctgtgaagaagaagtatggagggatgttgccaaag 263

                                                                    
Query: 181 aagcctccactaatatccaaggatcatgaacgtgcttattttgattctgctgattgg 237
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagcctccactaatatctaaggatcatgaacgtgcttattttgattctgctgattgg 320


>gnl|LJGI|TC60710 similar to UniRef100_Q0DFW5 Cluster: Os05g0566600 protein; n=2;
           Oryza sativa Japonica Group|Rep: Os05g0566600 protein -
           Oryza sativa subsp. japonica (Rice), partial (71%)
          Length = 753

 Score =  383 bits (193), Expect = e-106
 Identities = 226/237 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagaggctaaagatgttgtggatttgaagaattcccctgaaggtgaagctatctct 60
           |||||||||||||||||||||| ||||||||||||||| ||||||||||| | || ||| 
Sbjct: 47  atgtcagaggctaaagatgttgaggatttgaagaattctcctgaaggtgacgttaactcc 106

                                                                       
Query: 61  catgattctggggatgatccgaaagaatcagataaagatcaaaatgatgaaagccccatg 120
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 107 catgattctggggatgatctcaaagaatcagataaagatcaaaatgatgaaagccccatg 166

                                                                       
Query: 121 ccctcacctcagcaggaggaagaagctgtgatgaagaagtatggagggatgttgccaaag 180
           || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 167 ccttcacctcagcaggaggaagaagctgtgaagaagaagtatggagggatgttgccaaag 226

                                                                    
Query: 181 aagcctccactaatatccaaggatcatgaacgtgcttattttgattctgctgattgg 237
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aagcctccactaatatctaaggatcatgaacgtgcttattttgattctgctgattgg 283


>gnl|LJGI|TC62284 homologue to UniRef100_A8MS32 Cluster: Uncharacterized protein
           At5g64130.3; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At5g64130.3 - Arabidopsis
           thaliana (Mouse-ear cress), partial (56%)
          Length = 716

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                       
Query: 117 catgccctcacctcagcaggaggaagaagctgtgatgaagaagtatggagggatgttgcc 176
           |||||| || || ||| ||||||| |||| ||| | |||||| |||||||| ||| ||||
Sbjct: 209 catgccgtcgccccagaaggaggaggaagttgtaaagaagaaatatggaggaatgatgcc 268

                                                                       
Query: 177 aaagaagcctccactaatatccaaggatcatgaacgtgcttattttgattctgctgattg 236
            || || || ||||| ||||| ||||| ||||| ||||| || || ||||||||||||||
Sbjct: 269 caaaaaaccaccactcatatctaaggaccatgagcgtgcatacttcgattctgctgattg 328

            
Query: 237 g 237
           |
Sbjct: 329 g 329