Miyakogusa Predicted Gene
- Lj3g3v0965970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0965970.1 Non Chatacterized Hit- tr|I1MJ62|I1MJ62_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,87,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; DYW_deaminase,NULL; no description,Tet,CUFF.41914.1
(1737 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS354774 similar to UniRef100_A2Q3P0 Cluster: Tetratric... 1108 0.0
gnl|LJGI|FS328438 similar to UniRef100_A2Q3P0 Cluster: Tetratric... 710 0.0
>gnl|LJGI|FS354774 similar to UniRef100_A2Q3P0 Cluster: Tetratricopeptide-like helical;
n=1; Medicago truncatula|Rep: Tetratricopeptide-like
helical - Medicago truncatula (Barrel medic), partial
(27%)
Length = 692
Score = 1108 bits (559), Expect = 0.0
Identities = 559/559 (100%)
Strand = Plus / Minus
Query: 1179 ggcaaaaattgcagccaaaaaactatttgacattgagcctaacaaccctgggaactatgt 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggcaaaaattgcagccaaaaaactatttgacattgagcctaacaaccctgggaactatgt 633
Query: 1239 ttcgttattcaacatccttgtcagtgccaaattgtggagtgaagcttcacaaatcagaat 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttcgttattcaacatccttgtcagtgccaaattgtggagtgaagcttcacaaatcagaat 573
Query: 1299 attaatgaaagataggggaattacaaaaactccaggctgtagttggcttcaagtgggaaa 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 attaatgaaagataggggaattacaaaaactccaggctgtagttggcttcaagtgggaaa 513
Query: 1359 tagagttcatacttttgttgttggagacagaagtaacacgggaagtgataaaatctacga 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tagagttcatacttttgttgttggagacagaagtaacacgggaagtgataaaatctacga 453
Query: 1419 gttcttggatgagttgggccagaaaatgaaattggctggatataagcctgacactgatta 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gttcttggatgagttgggccagaaaatgaaattggctggatataagcctgacactgatta 393
Query: 1479 tgttctgcaagatgtggatcaagaggaaaaagctgagagtctttgcaaccacagtgagaa 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgttctgcaagatgtggatcaagaggaaaaagctgagagtctttgcaaccacagtgagaa 333
Query: 1539 gctggctgttgcctttgggatacttaatttgaatggacaatcatctatacgggtttttaa 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gctggctgttgcctttgggatacttaatttgaatggacaatcatctatacgggtttttaa 273
Query: 1599 gaatttgagaatatgtggtgactgtcacaatgcaattaagtatatgtccaatgttgttgg 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaatttgagaatatgtggtgactgtcacaatgcaattaagtatatgtccaatgttgttgg 213
Query: 1659 tgtgacaattattgtaagagactccttgaggtttcatcacttcaaaaatggaaattgttc 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tgtgacaattattgtaagagactccttgaggtttcatcacttcaaaaatggaaattgttc 153
Query: 1719 ttgtcaagacttatggtga 1737
|||||||||||||||||||
Sbjct: 152 ttgtcaagacttatggtga 134
>gnl|LJGI|FS328438 similar to UniRef100_A2Q3P0 Cluster: Tetratricopeptide-like
helical; n=1; Medicago truncatula|Rep:
Tetratricopeptide-like helical - Medicago truncatula
(Barrel medic), partial (33%)
Length = 761
Score = 710 bits (358), Expect = 0.0
Identities = 358/358 (100%)
Strand = Plus / Plus
Query: 1 atgacgtctgatgtcttcttgagcaatgcactgattcatgcctatggtaaatgtaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atgacgtctgatgtcttcttgagcaatgcactgattcatgcctatggtaaatgtaaatgc 463
Query: 61 atcgagggcgcgaggcgtgtgtttgatgatttggttggcagagatgtggtttcttggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 atcgagggcgcgaggcgtgtgtttgatgatttggttggcagagatgtggtttcttggacc 523
Query: 121 tcgttgtcgtcatgctatgttaactgtggattgccccggcaaggcctggctatttttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcgttgtcgtcatgctatgttaactgtggattgccccggcaaggcctggctatttttcat 583
Query: 181 gaaatgggatggaatggggtgaaaccgaatgcagtaacagtatctagcatcttgcctgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaaatgggatggaatggggtgaaaccgaatgcagtaacagtatctagcatcttgcctgcg 643
Query: 241 tgctcagaattgaaagatttgaactcaggtaaggcgattcatggatttgcagtgagacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgctcagaattgaaagatttgaactcaggtaaggcgattcatggatttgcagtgagacat 703
Query: 301 gggatggtagaaaatgtttttgtttgcagcgcactcgtgagcatgtatgcaagatgtt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gggatggtagaaaatgtttttgtttgcagcgcactcgtgagcatgtatgcaagatgtt 761