Miyakogusa Predicted Gene
- Lj3g3v0964210.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0964210.2 Non Chatacterized Hit- tr|A5BCZ1|A5BCZ1_VITVI
Putative uncharacterized protein (Fragment) OS=Vitis
v,75.86,5e-18,TPR_REGION,Tetratricopeptide repeat-containing domain;
no description,Tetratricopeptide-like helical,CUFF.41851.2
(435 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73034 similar to UniRef100_A7QD88 Cluster: Chromosome... 823 0.0
gnl|LJGI|FS325799 similar to UniRef100_A7QD88 Cluster: Chromosom... 722 0.0
>gnl|LJGI|TC73034 similar to UniRef100_A7QD88 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (64%)
Length = 747
Score = 823 bits (415), Expect = 0.0
Identities = 430/435 (98%), Gaps = 5/435 (1%)
Strand = Plus / Plus
Query: 1 atggcgacgtcgaacaagatcgaacgcggtcaccagatgtaccgtgacggacgatacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atggcgacgtcgaacaagatcgaacgcggtcaccagatgtaccgtgacggacgatacagc 239
Query: 61 gaggcgttagggttttacacggaggcgatcgccatggccaagaccaatcctcagaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaggcgttagggttttacacggaggcgatcgccatggccaagaccaatcctcagaagatc 299
Query: 121 gctttgcatagcaatcgtgctgcttgcttcctcaagcttcaccatttcaacaaggcagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gctttgcatagcaatcgtgctgcttgcttcctcaagcttcaccatttcaacaaggcagca 359
Query: 181 gaagagtgcacctcagtgcttgagcttgatcacgagcacagtggagctttgatgctgcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gaagagtgcacctcagtgcttgagcttgatcacgagcacagtggagctttgatgctgcga 419
Query: 241 gctcaaacactggtgaccttgaaggagtaccattcagcacttttcgatgtcaatagactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gctcaaacactggtgaccttgaaggagtaccattcagcacttttcgatgtcaatagactc 479
Query: 301 ttggaattgaatccagactcagaggtctatcaaaatcttcacgcccgcttgaagacacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttggaattgaatccagactcagaggtctatcaaaatcttcacgcccgcttgaagacacag 539
Query: 361 ttggaaagtcacttgctccaataccagagtcagaagaggagtttgaagaacaaggagatg 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tt-----gtcacttgctccaataccagagtcagaagaggagtttgaagaacaaggagatg 594
Query: 421 aggaggctgagctga 435
|||||||||||||||
Sbjct: 595 aggaggctgagctga 609
>gnl|LJGI|FS325799 similar to UniRef100_A7QD88 Cluster: Chromosome undetermined
scaffold_80, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_80, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (64%)
Length = 799
Score = 722 bits (364), Expect = 0.0
Identities = 364/364 (100%)
Strand = Plus / Plus
Query: 1 atggcgacgtcgaacaagatcgaacgcggtcaccagatgtaccgtgacggacgatacagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atggcgacgtcgaacaagatcgaacgcggtcaccagatgtaccgtgacggacgatacagc 107
Query: 61 gaggcgttagggttttacacggaggcgatcgccatggccaagaccaatcctcagaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gaggcgttagggttttacacggaggcgatcgccatggccaagaccaatcctcagaagatc 167
Query: 121 gctttgcatagcaatcgtgctgcttgcttcctcaagcttcaccatttcaacaaggcagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gctttgcatagcaatcgtgctgcttgcttcctcaagcttcaccatttcaacaaggcagca 227
Query: 181 gaagagtgcacctcagtgcttgagcttgatcacgagcacagtggagctttgatgctgcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gaagagtgcacctcagtgcttgagcttgatcacgagcacagtggagctttgatgctgcga 287
Query: 241 gctcaaacactggtgaccttgaaggagtaccattcagcacttttcgatgtcaatagactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gctcaaacactggtgaccttgaaggagtaccattcagcacttttcgatgtcaatagactc 347
Query: 301 ttggaattgaatccagactcagaggtctatcaaaatcttcacgcccgcttgaagacacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ttggaattgaatccagactcagaggtctatcaaaatcttcacgcccgcttgaagacacag 407
Query: 361 ttgg 364
||||
Sbjct: 408 ttgg 411
Score = 145 bits (73), Expect = 3e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 363 ggaaagtcacttgctccaataccagagtcagaagaggagtttgaagaacaaggagatgag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ggaaagtcacttgctccaataccagagtcagaagaggagtttgaagaacaaggagatgag 765
Query: 423 gaggctgagctga 435
|||||||||||||
Sbjct: 766 gaggctgagctga 778