Miyakogusa Predicted Gene

Lj3g3v0963170.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0963170.1 Non Chatacterized Hit- tr|C5YSI7|C5YSI7_SORBI
Putative uncharacterized protein Sb08g022330
OS=Sorghu,43.48,6e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Auxin_inducible,Auxin responsive SAUR pro,CUFF.41847.1
         (609 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72414 similar to UniRef100_A7QD67 Cluster: Chromosome...    64   1e-09

>gnl|LJGI|TC72414 similar to UniRef100_A7QD67 Cluster: Chromosome undetermined
           scaffold_80, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_80, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (62%)
          Length = 500

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                       
Query: 370 ccggagggccatgtgccggtgtacgtcggcgatgagatggaacggttcgtggtgagtgcg 429
           |||||||| || |||||||| ||||||||||| ||||||||||| ||||| ||    |||
Sbjct: 270 ccggagggacacgtgccggtctacgtcggcgacgagatggaacgtttcgtcgtctccgcg 329

                                   
Query: 430 gacctcctcaaccaccctgtcttc 453
           || || |||||||| |||||||||
Sbjct: 330 gagcttctcaaccatcctgtcttc 353