Miyakogusa Predicted Gene
- Lj3g3v0962150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0962150.1 tr|I3RSY1|I3RSY1_LOTJA R2R3MYB transcription
factor (Fragment) OS=Lotus japonicus GN=MYB10 PE=2
SV=1,100,0,HTH_MYB,Myb domain; Homeodomain-like,Homeodomain-like;
seg,NULL; MYB DNA BINDING / TRANSCRIPTION FAC,CUFF.41845.1
(1098 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV778116 646 0.0
gnl|LJGI|AV421932 homologue to UniRef100_Q43524 Cluster: Transcr... 68 1e-10
gnl|LJGI|BW624444 homologue to UniRef100_A7PCT7 Cluster: Chromos... 62 8e-09
gnl|LJGI|TC75066 similar to UniRef100_A7Q1U0 Cluster: Chromosome... 58 1e-07
gnl|LJGI|TC62535 similar to UniRef100_A7Q8B3 Cluster: Chromosome... 58 1e-07
gnl|LJGI|TC69494 UniRef100_Q84PP4 Cluster: Transcription factor ... 54 2e-06
gnl|LJGI|BW599880 similar to UniRef100_Q9S7E3 Cluster: GmMYB29A1... 52 7e-06
gnl|LJGI|TC81472 homologue to UniRef100_Q2LME4 Cluster: MYB20; n... 52 7e-06
gnl|LJGI|TC62351 similar to UniRef100_Q0PJJ9 Cluster: MYB transc... 52 7e-06
gnl|LJGI|TC57493 similar to UniRef100_A2Q4I4 Cluster: Homeodomai... 52 7e-06
>gnl|LJGI|AV778116
Length = 543
Score = 646 bits (326), Expect = 0.0
Identities = 338/342 (98%)
Strand = Plus / Minus
Query: 757 gttgaaattccatgggaatcagattatgatatttggagtttgttagatagcattgaatct 816
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 543 gttgaaattccatgggaatcagattatgatatttggattttgttagatagcattgaatct 484
Query: 817 ttcccaccaaatgaagtaccattgggggccagtcagaatcatgatcttggagtagagagt 876
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttcccacccaatgaagtaccattgggggccagtcagaatcatgatcttggagtagagagt 424
Query: 877 gttcaagttactgaagccatgaagtggtcccatgaatttgaaggcaaggctggagtagtt 936
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 423 gttcaagttactgaagccatgaagtggtcccatgaatttgaaggcaaggcgggagtagtt 364
Query: 937 ggtgaaacaaatgagtcaaacaaggatcagttcctaccaaagaattatgcagttgagcca 996
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 363 ggtgaaacaaatgagtcaaacaaggatcagttcctacccaagaattatgcagttgagcca 304
Query: 997 caaatagaccctcctcagacatttcacttcaatgacatgacaagcccagcagaatctgaa 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caaatagaccctcctcagacatttcacttcaatgacatgacaagcccagcagaatctgaa 244
Query: 1057 ttagactttgattttattcaattatggccctcttccccttaa 1098
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttagactttgattttattcaattatggccctcttccccttaa 202
>gnl|LJGI|AV421932 homologue to UniRef100_Q43524 Cluster: Transcription factor; n=1;
Solanum lycopersicum|Rep: Transcription factor - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(29%)
Length = 369
Score = 67.9 bits (34), Expect = 1e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 134 aagctgggcttcagagatgtgggaaaagttgtcgtttgagatggatcaattatctgag 191
||||||||||||| || |||||||| |||||||| ||||||||||| |||||| ||||
Sbjct: 205 aagctgggcttcaaaggtgtgggaagagttgtcgcttgagatggattaattatttgag 262
>gnl|LJGI|BW624444 homologue to UniRef100_A7PCT7 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 487
Score = 61.9 bits (31), Expect = 8e-09
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 119 gttctcttcccaaacaagctgggcttcagagatgtgggaaaagttgtcgtttgagatgga 178
||||| |||||||||||||||| || || |||||||| || ||||| | ||||||||||
Sbjct: 391 gttctgttcccaaacaagctggactgcaaagatgtggaaagagttgcaggttgagatgga 450
Query: 179 tcaattatctgaggccagatgtgaagagagg 209
| || || ||||||| ||| ||||||||||
Sbjct: 451 taaactacttgaggcctgatttgaagagagg 481
>gnl|LJGI|TC75066 similar to UniRef100_A7Q1U0 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 762
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 101 atggccatgagaattggcgttctcttcccaaacaagctggg 141
||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 212 atggccatgccaattggcgtgctcttcccaaacaagctggg 252
>gnl|LJGI|TC62535 similar to UniRef100_A7Q8B3 Cluster: Chromosome chr14 scaffold_63,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_63, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1350
Score = 58.0 bits (29), Expect = 1e-07
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 262 ggaaacaagtggtcaaagattgcatctcttttgcctggtaggactgacaatgagatcaag 321
||||||| ||||| |||||||| |||| | | ||||| || ||||| ||||||||||||
Sbjct: 407 ggaaacagatggtctaagattgcttctcatctccctggaagaactgataatgagatcaag 466
Query: 322 aacgtgtggaacacccacttaaagaaaaa 350
||| ||||| |||||| ||||||||||
Sbjct: 467 aaccactggaatacccacataaagaaaaa 495
>gnl|LJGI|TC69494 UniRef100_Q84PP4 Cluster: Transcription factor MYB102; n=1; Lotus
japonicus|Rep: Transcription factor MYB102 - Lotus
japonicus, complete
Length = 1245
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 304 actgacaatgagatcaagaacgtgtggaacacccacttaaagaaaaa 350
|||||||||||||||||||| | |||||||| || |||||||||||
Sbjct: 329 actgacaatgagatcaagaatttttggaacactcatttaaagaaaaa 375
>gnl|LJGI|BW599880 similar to UniRef100_Q9S7E3 Cluster: GmMYB29A1 protein; n=1;
Glycine max|Rep: GmMYB29A1 protein - Glycine max
(Soybean), partial (40%)
Length = 435
Score = 52.0 bits (26), Expect = 7e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 304 actgacaatgagatcaagaacgtgtggaacacccacttaaagaaaa 349
||||||||||| || ||||| |||||| |||||||||| |||||||
Sbjct: 389 actgacaatgaaataaagaatgtgtggcacacccacttgaagaaaa 434
>gnl|LJGI|TC81472 homologue to UniRef100_Q2LME4 Cluster: MYB20; n=1; Malus x
domestica|Rep: MYB20 - Malus domestica (Apple) (Malus
sylvestris), partial (42%)
Length = 1348
Score = 52.0 bits (26), Expect = 7e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 145 cagagatgtgggaaaagttgtcgtttgagatggatcaattatctgaggcc 194
||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 194 cagagatgtgggaaaagttgtcggcttcgatggatcaattacttgaggcc 243
>gnl|LJGI|TC62351 similar to UniRef100_Q0PJJ9 Cluster: MYB transcription factor
MYB92; n=2; Glycine max|Rep: MYB transcription factor
MYB92 - Glycine max (Soybean), partial (60%)
Length = 1128
Score = 52.0 bits (26), Expect = 7e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 124 cttcccaaacaagctgggcttcagagatgtgggaaaagttgtcgtttgagatggatcaat 183
||||||||| |||||||||||| ||||||||| || ||||| | | |||||||| ||
Sbjct: 208 cttcccaaaaaagctgggcttctgagatgtggaaagagttgcagactaagatggatgaac 267
Query: 184 tatctgaggccaga 197
|||||||| |||||
Sbjct: 268 tatctgagaccaga 281
>gnl|LJGI|TC57493 similar to UniRef100_A2Q4I4 Cluster: Homeodomain-related; n=1;
Medicago truncatula|Rep: Homeodomain-related - Medicago
truncatula (Barrel medic), partial (22%)
Length = 1688
Score = 52.0 bits (26), Expect = 7e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 295 cctggtaggactgacaatgagatcaagaac 324
||||| ||||||||||||||||||||||||
Sbjct: 495 cctggcaggactgacaatgagatcaagaac 524