Miyakogusa Predicted Gene
- Lj3g3v0951100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0951100.1 Non Chatacterized Hit- tr|I3T584|I3T584_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.71,0,Mitochondrial termination factor repeats,Mitochodrial
transcription termination factor-related; seg,,CUFF.41840.1
(1023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73264 similar to UniRef100_A7PP62 Cluster: Chromosome... 2006 0.0
gnl|LJGI|AV776282 similar to UniRef100_A7PP62 Cluster: Chromosom... 708 0.0
gnl|LJGI|AV780538 similar to UniRef100_A7PP62 Cluster: Chromosom... 613 e-175
gnl|LJGI|DC598487 homologue to UniRef100_A3PJT1 Cluster: Mammali... 361 6e-99
gnl|LJGI|AV774955 204 8e-52
>gnl|LJGI|TC73264 similar to UniRef100_A7PP62 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1130
Score = 2006 bits (1012), Expect = 0.0
Identities = 1022/1024 (99%), Gaps = 1/1024 (0%)
Strand = Plus / Plus
Query: 1 atgtcgtcctcttctgccactgcaacaaccctcttgttctccaccgatcaccatgttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgtcgtcctcttctgccactgcaacaaccctcttgttctccaccgatcaccatgttccc 131
Query: 61 ctctctccttctccaaccattcccaaatccttcactcgcctctgcaaacccttccattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ctctctccttctccaaccattcccaaatccttcactcgcctctgcaaacccttccattca 191
Query: 121 agagttcccacctccattcacttccattgcgctcgaccatccttcttcgtcagggccact 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggagttcccacctccattcacttccattgcgctcgaccatccttcttcgtcagggccact 251
Query: 181 gttataaagtggcgatgtccaaagcaaaccctccctcccaaagataccgttttcaaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gttataaagtggcgatgtccaaagcaaaccctccctcccaaagataccgttttcaaagaa 311
Query: 241 aaagtcatccctcccaacgataccggttttgaagaaaaagtcctatatcttgagtctatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaagtcatccctcccaacgataccggttttgaagaaaaagtcctatatcttgagtctatc 371
Query: 301 ggtattgactctttctcactcattgaaaatcatccaatgctgatcactgcatcactggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggtattgactctttctcactcattgaaaatcatccaatgctgatcactgcatcactggct 431
Query: 361 gacataaaatccactgtagaatacattacctccatggatttctctgcaattgagtttcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gacataaaatccactgtagaatacattacctccatggatttctctgcaattgagtttcag 491
Query: 421 cgtatagttggcatgtgtcctgagattctaactaccaaagtctcagacatcatacctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgtatagttggcatgtgtcctgagattctaactaccaaagtctcagacatcatacctgtc 551
Query: 481 ttcacgttccttcaccgtgaagttcatgtaaaaggctcagatattaagcgggtcataaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttcacgttccttcaccgtgaagttcatgtaaaaggctcagatattaagcgggtcataaat 611
Query: 541 cgtcgtcccaggttgattgtctgcagtgttaataaccgactccgccctaccttatacttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cgtcgtcccaggttgattgtctgcagtgttaataaccgactccgccctaccttatacttc 671
Query: 601 ctccaaagtattggcatagaagaggtaagtaagcacactgatttgctatcatgtagtgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctccaaagtattggcatagaagaggtaagtaagcacactgatttgctatcatgtagtgtc 731
Query: 661 gaagataagtttttacccaggattgattactttgagaatattgggttttctcgcgatgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gaagataagtttttacccaggattgattactttgagaatattgggttttctcgcgatgat 791
Query: 721 gcaacttcaatgtttcgaagatttcctcagttgttttgttgtagtattaagaataatttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gcaacttcaatgtttcgaagatttcctcagttgttttgttgtagtattaagaataatttg 851
Query: 781 gagcccaaatacaattactttgtggtggagatggggagagatttgaaggagctgaaagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gagcccaaatacaattactttgtggtggagatggggagagatttgaaggagctgaaagaa 911
Query: 841 tttccacagtatttctcatttagcttagaaaatagaattaagcctagacataaacaatgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 tttccacagtatttctcatttagcttagaaaatagaattaagcctagacataaacaatgt 971
Query: 901 gtagaa-ttgggggtgtgtttcactctccctgtgttattaaagacaagtgaagtgacatt 959
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 gtagaatttgggggtgtgtttcactctccctgtgttattaaagacaagtgaagtgacatt 1031
Query: 960 tagaaatagattagacttatgtgtaaattcttcaacacccttggaaacatctcctctgtg 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 tagaaatagattagacttatgtgtaaattcttcaacacccttggaaacatctcctctgtg 1091
Query: 1020 gtgt 1023
||||
Sbjct: 1092 gtgt 1095
>gnl|LJGI|AV776282 similar to UniRef100_A7PP62 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 564
Score = 708 bits (357), Expect = 0.0
Identities = 436/457 (95%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 540 tcgtcgtcccaggttgattgtctgcagtgttaataaccgactccgccctaccttatactt 599
||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 564 tcgtcgtcccaggctgattgtctgcagtctcaataaccgactccgccctaccttatactt 505
Query: 600 cctccaaagtattggcatagaagaggtaagtaagcacactgatttgctatcatgtagtgt 659
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 504 cctcccaagtattggcatagaagaggtaagtaagcacactgacttgctatcatgtagtgt 445
Query: 660 cgaagataagtttttacccaggattgattactttgagaatattgggttttctcgcgatga 719
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgaagataaatttttacccaggcttgattactttgagaatattgggttttctcgcgatga 385
Query: 720 tgcaacttcaatgtttcgaagatttcctcagttgttttgttgtagtattaagaataattt 779
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 384 tgcaacttcaatgtttcgaagatttcctcagtcgttttgttgtagtattaagaataattt 325
Query: 780 ggagcccaaatacaattactttgtggtggagatggggagagatttgaaggag-ctgaaag 838
||||||||| ||| | |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 324 ggagcccaactaccaatactttgtggtggagatggggagagagatgaaggagactgaaag 265
Query: 839 aatttccacagta-tttctcatttagcttagaaaatagaattaagcctagacataaacaa 897
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 aatttccacagtactctctcatttagcttagaaaatagaattaagcctagacataaacca 205
Query: 898 tgtg-tagaattgggggtgtgtttcactct-ccctgtgttattaaagacaagtgaagtga 955
|||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 204 tgtgctagaattgggggtgtgtttcactctcccctgtcgtattaaagacaagtgaagtga 145
Query: 956 catttagaaatagattagacttatgtgtaaattcttc 992
|||||||||||||||||||||||||||||||||||||
Sbjct: 144 catttagaaatagattagacttatgtgtaaattcttc 108
>gnl|LJGI|AV780538 similar to UniRef100_A7PP62 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 503
Score = 613 bits (309), Expect = e-175
Identities = 389/413 (94%), Gaps = 2/413 (0%)
Strand = Plus / Minus
Query: 613 ggcatagaagaggtaagtaagcacactgatttgctatcatgtagtgtcgaagataagttt 672
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 503 ggcatagaagaggtaagtaagcaccctgatttgctatcatgtagtgtcgaagataagttt 444
Query: 673 ttacccaggattgattactttgagaatattgggttttctcgcgatgatgcaacttcaatg 732
|||||| || |||||||||||||||||||||||||||||| ||||||||| ||||| |||
Sbjct: 443 ttaccccggcttgattactttgagaatattgggttttctctcgatgatgccacttccatg 384
Query: 733 tttcgaagatttcctcagttgttttgttgtagtattaagaataatttggagcccaaatac 792
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct: 383 tttcgaagatttcctcagttgttttgttgtagtattaagaataaattggagccccaatcc 324
Query: 793 aattactttgtggtggagatggggagagatttgaaggagctgaaagaatttccacagta- 851
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 323 cattactttgtggtggagatggggagagatttgaaggagctgaaagaatttcccccgtac 264
Query: 852 tttctcatttagcttagaaaatagaattaagcctagacataaacaatgtgtagaattggg 911
| |||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||
Sbjct: 263 tctctcatttagcttagaaaatagaattaagcctagacctaaaccatgtctagaattggg 204
Query: 912 ggtgtgtttcactctccctgtg-ttattaaagacaagtgaagtgacatttagaaatagat 970
|||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||||||
Sbjct: 203 ggtgtgtttcactctccctgtgcttatttaagaacagtgaagtgacctttagaaatagat 144
Query: 971 tagacttatgtgtaaattcttcaacacccttggaaacatctcctctgtggtgt 1023
||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 143 tagacttatgtgtaaattcttcaacacccctggcaacatctcctctgtggtgt 91
>gnl|LJGI|DC598487 homologue to UniRef100_A3PJT1 Cluster: Mammalian cell entry related
domain protein; n=1; Rhodobacter sphaeroides ATCC
17029|Rep:, partial (3%)
Length = 544
Score = 361 bits (182), Expect = 6e-99
Identities = 182/182 (100%)
Strand = Plus / Plus
Query: 1 atgtcgtcctcttctgccactgcaacaaccctcttgttctccaccgatcaccatgttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atgtcgtcctcttctgccactgcaacaaccctcttgttctccaccgatcaccatgttccc 112
Query: 61 ctctctccttctccaaccattcccaaatccttcactcgcctctgcaaacccttccattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ctctctccttctccaaccattcccaaatccttcactcgcctctgcaaacccttccattca 172
Query: 121 agagttcccacctccattcacttccattgcgctcgaccatccttcttcgtcagggccact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 agagttcccacctccattcacttccattgcgctcgaccatccttcttcgtcagggccact 232
Query: 181 gt 182
||
Sbjct: 233 gt 234
>gnl|LJGI|AV774955
Length = 248
Score = 204 bits (103), Expect = 8e-52
Identities = 148/155 (95%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 869 aaaatagaattaagcc-tagacataaaca-atg-tg-tagaattgggggtgtgtttcact 924
|||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||
Sbjct: 208 aaaatagaattaagccgtagacataaacccatgctgctagaattgggggtgtgtttcact 149
Query: 925 ctccctgtgttattaaagacaagtgaagtgacatttagaaatagattagacttatgtgta 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ctccctgtgttattaaagacaagtgaagtgacatttagaaatagattagacttatgtgta 89
Query: 985 aattcttcaacaccct-tgga-aacatctcctctg 1017
|||||||||||||||| |||| |||||||||||||
Sbjct: 88 aattcttcaacaccctctggacaacatctcctctg 54