Miyakogusa Predicted Gene

Lj3g3v0951090.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0951090.1 tr|Q655Z1|Q655Z1_ORYSJ Epstein-Barr virus
EBNA-1-like OS=Oryza sativa subsp. japonica
GN=P0633E08.30,68.18,4e-19,seg,NULL; coiled-coil,NULL,CUFF.41839.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW594963                                                     539   e-153

>gnl|LJGI|BW594963 
          Length = 486

 Score =  539 bits (272), Expect = e-153
 Identities = 275/276 (99%)
 Strand = Plus / Plus

                                                                       
Query: 184 tcaaaagacacggacaaaaggaaacatagtaaaggtgatggccatatggaattccaagat 243
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 208 tcaaaagacacggacaaaaggaaacgtagtaaaggtgatggccatatggaattccaagat 267

                                                                       
Query: 244 ttgtccaatgaggactattttgctaagaataatgagtttgctacctggctgaaagaagag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttgtccaatgaggactattttgctaagaataatgagtttgctacctggctgaaagaagag 327

                                                                       
Query: 304 aagaatgtgtttttctctgatctttcatctgagtcggcacgtgagatgtttggcgatttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aagaatgtgtttttctctgatctttcatctgagtcggcacgtgagatgtttggcgatttt 387

                                                                       
Query: 364 gtcaaggcttggaatagaggaaaactcgaatcgaattactatgaaggcattgcaagcgga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtcaaggcttggaatagaggaaaactcgaatcgaattactatgaaggcattgcaagcgga 447

                                               
Query: 424 cctcgcacagcccataactggaaaatcaagaagtag 459
           ||||||||||||||||||||||||||||||||||||
Sbjct: 448 cctcgcacagcccataactggaaaatcaagaagtag 483



 Score =  109 bits (55), Expect = 2e-23
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                 
Query: 1  atgggaagcgacagaaaatcgaagcgaccttctcattcttcaccttccgattctc 55
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atgggaagcgacagaaaatcgaagcgaccttctcattcttcaccttccgattctc 79