Miyakogusa Predicted Gene
- Lj3g3v0951030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0951030.1 tr|I3SFE3|I3SFE3_MEDTR Proteasome subunit alpha
type OS=Medicago truncatula PE=2
SV=1,98.09,0,PROTEASOME_A_2,Proteasome A-type subunit; no
description,NULL; Proteasome,Proteasome, subunit alpha/,CUFF.41855.1
(477 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67518 homologue to UniRef100_Q38M52 Cluster: Proteaso... 868 0.0
gnl|LJGI|TC77185 homologue to UniRef100_A5BF27 Cluster: Proteaso... 720 0.0
gnl|LJGI|TC66282 homologue to UniRef100_O23708 Cluster: Proteaso... 690 0.0
>gnl|LJGI|TC67518 homologue to UniRef100_Q38M52 Cluster: Proteasome subunit alpha
type; n=1; Solanum tuberosum|Rep: Proteasome subunit
alpha type - Solanum tuberosum (Potato), partial (94%)
Length = 952
Score = 868 bits (438), Expect = 0.0
Identities = 441/442 (99%)
Strand = Plus / Plus
Query: 36 caggaaacaggctgagcagtatcatcgattatacaaagaaccaatccctgtcactcaact 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 caggaaacaggctgagcagtatcatcgattatacaaagaaccaatccctgtcactcaact 345
Query: 96 tgttagggaagttgctgctgttatgcaggaatttactcagtctggtggtgttaggccttt 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tgttagggaagttgctgctgttatgcaggaatttactcagtctggtggtgttaggccttt 405
Query: 156 tggagtgtccctgctgattgctgggtttgatgataatggaccacaattatatcaggtaga 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tggagtgtccctgctgattgctgggtttgatgataatggaccacaattatatcaggtaga 465
Query: 216 tccatcaggttcgtacttttcttggaaagcttctgctatggggaaaaatgtttctaatgc 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tccatcaggttcgtacttttcttggaaagcttctgctatggggaaaaatgtttctaatgc 525
Query: 276 aaaaacatttcttgagaagaggtacaccgatgaaatggagcttgatgatgcagtccacac 335
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 526 aaaaacatttcttgagaagaggtacaccgatgaaatggcgcttgatgatgcagtccacac 585
Query: 336 tgcactattgaccctgaaggaagggtttgagggacagatctcagcgaaaaatattgagat 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgcactattgaccctgaaggaagggtttgagggacagatctcagcgaaaaatattgagat 645
Query: 396 tggcataattggcgcagacaaaaagttcagggtattgacaccagctgaaattgatgatta 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tggcataattggcgcagacaaaaagttcagggtattgacaccagctgaaattgatgatta 705
Query: 456 tttgggtgaagtagaataaagt 477
||||||||||||||||||||||
Sbjct: 706 tttgggtgaagtagaataaagt 727
>gnl|LJGI|TC77185 homologue to UniRef100_A5BF27 Cluster: Proteasome subunit alpha
type; n=1; Vitis vinifera|Rep: Proteasome subunit alpha
type - Vitis vinifera (Grape), partial (97%)
Length = 729
Score = 720 bits (363), Expect = 0.0
Identities = 402/419 (95%)
Strand = Plus / Plus
Query: 1 atgggtcctgatttccgagttttggttcgaaaaagcaggaaacaggctgagcagtatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgggtcctgatttccgagttttggttcgaaaaagcaggaaacaggctgagcagtatcat 335
Query: 61 cgattatacaaagaaccaatccctgtcactcaacttgttagggaagttgctgctgttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cgattatacaaagaaccaatccctgtcactcaacttgttagggaagttgctgctgttatg 395
Query: 121 caggaatttactcagtctggtggtgttaggccttttggagtgtccctgctgattgctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 caggaatttactcagtctggtggtgttaggccttttggagtgtccctgctgattgctggg 455
Query: 181 tttgatgataatggaccacaattatatcaggtagatccatcaggttcgtacttttcttgg 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 456 tttgatgataatggaccacaattatatcaggtanatccatcaggttcgtacttttcttgg 515
Query: 241 aaagcttctgctatggggaaaaatgtttctaatgcaaaaacatttcttgagaagaggtac 300
|||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 516 aaagcttctgctatggggaaaaatgtttctaatgcaaaaacatttcttganaaaaagtac 575
Query: 301 accgatgaaatggagcttgatgatgcagtccacactgcactattgaccctgaaggaaggg 360
|||||| ||||||| |||||||||||| |||||||||||||||||||||| || ||| ||
Sbjct: 576 accgatnaaatggancttgatgatgcantccacactgcactattgaccctnaangaangg 635
Query: 361 tttgagggacagatctcagcgaaaaatattgagattggcataattggcgcagacaaaaa 419
||||| ||||| |||||| ||||||||||||| ||||||||||||||| || | |||||
Sbjct: 636 tttgaaggacanatctcancgaaaaatattgaaattggcataattggcncanaaaaaaa 694
>gnl|LJGI|TC66282 homologue to UniRef100_O23708 Cluster: Proteasome subunit alpha
type-2-A; n=1; Arabidopsis thaliana|Rep: Proteasome
subunit alpha type-2-A - Arabidopsis thaliana (Mouse-ear
cress), complete
Length = 1102
Score = 690 bits (348), Expect = 0.0
Identities = 441/472 (93%)
Strand = Plus / Plus
Query: 1 atgggtcctgatttccgagttttggttcgaaaaagcaggaaacaggctgagcagtatcat 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 318 atgggtcctgatttccgagttttggttcgtaaaagcaggaaacaggctgagcaatatcat 377
Query: 61 cgattatacaaagaaccaatccctgtcactcaacttgttagggaagttgctgctgttatg 120
|||||||| ||||||||||||||||| || || ||||| ||||||||||| |||||||||
Sbjct: 378 cgattatataaagaaccaatccctgttacgcagcttgtaagggaagttgcagctgttatg 437
Query: 121 caggaatttactcagtctggtggtgttaggccttttggagtgtccctgctgattgctggg 180
|| ||||||||||||||||||||||||||||| ||||| ||||| |||||| |||| |||
Sbjct: 438 caagaatttactcagtctggtggtgttaggccctttggtgtgtctctgctggttgcaggg 497
Query: 181 tttgatgataatggaccacaattatatcaggtagatccatcaggttcgtacttttcttgg 240
|||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||||
Sbjct: 498 tttgatgataatggaccacaattatatcaggtggatccatccggttcatatttttcttgg 557
Query: 241 aaagcttctgctatggggaaaaatgtttctaatgcaaaaacatttcttgagaagaggtac 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 558 aaagcttctgctatggggaaaaatgtttctaatgcaaagacatttcttgagaagaggtac 617
Query: 301 accgatgaaatggagcttgatgatgcagtccacactgcactattgaccctgaaggaaggg 360
|| ||||| |||||||||||||||||||||||||| ||| | ||||| ||||||||||||
Sbjct: 618 acagatgatatggagcttgatgatgcagtccacacagcaattttgacactgaaggaaggg 677
Query: 361 tttgagggacagatctcagcgaaaaatattgagattggcataattggcgcagacaaaaag 420
|||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |||
Sbjct: 678 tttgagggacagatctcagcgaaaaatattgaaattggcataattggtgcggacaagaag 737
Query: 421 ttcagggtattgacaccagctgaaattgatgattatttgggtgaagtagaat 472
|||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 738 ttcagggtattgacaccagccgagattgatgattatttgggtgaagtagaat 789