Miyakogusa Predicted Gene
- Lj3g3v0950580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0950580.1 Non Chatacterized Hit- tr|G7JC10|G7JC10_MEDTR
Putative ribosome biogenesis GTPase RsgA OS=Medicago
t,88.01,0,seg,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; Nucleic acid-binding
proteins,N,NODE_48441_length_1250_cov_77.383202.path1.1
(1128 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63028 similar to UniRef100_A7QP87 Cluster: Chromosome... 922 0.0
gnl|LJGI|FS339513 similar to UniRef100_A7QP87 Cluster: Chromosom... 854 0.0
>gnl|LJGI|TC63028 similar to UniRef100_A7QP87 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 790
Score = 922 bits (465), Expect = 0.0
Identities = 465/465 (100%)
Strand = Plus / Plus
Query: 1 atgcgcgtcgtgctcccttccggcggagttgagcttctctgcgtggtgagggcgcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgcgcgtcgtgctcccttccggcggagttgagcttctctgcgtggtgagggcgcttctg 385
Query: 61 aagaagatcaagcgtagagtcatggttggtgacaaggtgcttgttggttccatcgattgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aagaagatcaagcgtagagtcatggttggtgacaaggtgcttgttggttccatcgattgg 445
Query: 121 gtggatcgtaggggcatgattgagaacgtttttcagcggaattcggagattcttgaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtggatcgtaggggcatgattgagaacgtttttcagcggaattcggagattcttgaccct 505
Query: 181 cctgttgctaatgttgaccatttgcttgtgcttttctcgcttcagaaccctaagcctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cctgttgctaatgttgaccatttgcttgtgcttttctcgcttcagaaccctaagcctgag 565
Query: 241 ccatttacgctcacaaggtttttggttgaagctgagtctactgggattcctcttactctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccatttacgctcacaaggtttttggttgaagctgagtctactgggattcctcttactctt 625
Query: 301 gcactcaacaagattgagcttgtggataatgagaccgtggcttcctggaaggctagggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gcactcaacaagattgagcttgtggataatgagaccgtggcttcctggaaggctagggta 685
Query: 361 cgggattggggctacgatccaattttgtgcagtgttgaatctgtacataaccttgatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 cgggattggggctacgatccaattttgtgcagtgttgaatctgtacataaccttgatctt 745
Query: 421 cttgcgttcaaattgagagatcaaacaacagtgattgtgggtcct 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cttgcgttcaaattgagagatcaaacaacagtgattgtgggtcct 790
>gnl|LJGI|FS339513 similar to UniRef100_A7QP87 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 808
Score = 854 bits (431), Expect = 0.0
Identities = 434/435 (99%)
Strand = Plus / Plus
Query: 1 atgcgcgtcgtgctcccttccggcggagttgagcttctctgcgtggtgagggcgcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atgcgcgtcgtgctcccttccggcggagttgagcttctctgcgtggtgagggcgcttctg 433
Query: 61 aagaagatcaagcgtagagtcatggttggtgacaaggtgcttgttggttccatcgattgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aagaagatcaagcgtagagtcatggttggtgacaaggtgcttgttggttccatcgattgg 493
Query: 121 gtggatcgtaggggcatgattgagaacgtttttcagcggaattcggagattcttgaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtggatcgtaggggcatgattgagaacgtttttcagcggaattcggagattcttgaccct 553
Query: 181 cctgttgctaatgttgaccatttgcttgtgcttttctcgcttcagaaccctaagcctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cctgttgctaatgttgaccatttgcttgtgcttttctcgcttcagaaccctaagcctgag 613
Query: 241 ccatttacgctcacaaggtttttggttgaagctgagtctactgggattcctcttactctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ccatttacgctcacaaggtttttggttgaagctgagtctactgggattcctcttactctt 673
Query: 301 gcactcaacaagattgagcttgtggataatgagaccgtggcttcctggaaggctagggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcactcaacaagattgagcttgtggataatgagaccgtggcttcctggaaggctagggta 733
Query: 361 cgggattggggctacgatccaattttgtgcagtgttgaatctgtacataaccttgatctt 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 734 cgggattggggctacgatccaattttgtgcagtgttgaatctggacataaccttgatctt 793
Query: 421 cttgcgttcaaattg 435
|||||||||||||||
Sbjct: 794 cttgcgttcaaattg 808