Miyakogusa Predicted Gene

Lj3g3v0948400.4
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0948400.4 Non Chatacterized Hit- tr|I1MJD9|I1MJD9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.1,0.0000000003,Terpenoid cyclases/Protein
prenyltransferases,Terpenoid cyclases/protein prenyltransferase
alpha-alp,CUFF.41978.4
         (1377 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP075594 similar to UniRef100_A4KAG6 Cluster: KSL2; n=1...   565   e-160

>gnl|LJGI|BP075594 similar to UniRef100_A4KAG6 Cluster: KSL2; n=1; Oryza sativa Japonica
            Group|Rep: KSL2 - Oryza sativa subsp. japonica (Rice),
            partial (4%)
          Length = 453

 Score =  565 bits (285), Expect = e-160
 Identities = 407/439 (92%), Gaps = 9/439 (2%)
 Strand = Plus / Plus

                                                                        
Query: 733  ttcaaatcggaagttcgaagtgtattggaagaaacacacagatattggatgcaaggaatg 792
            ||||| |||||||||||| | |||| |||||||||||||| |||| ||||||||||||||
Sbjct: 19   ttcaactcggaagttcgagg-gtat-ggaagaaacacacatatat-ggatgcaaggaatg 75

                                                                        
Query: 793  gaagatattttcttagaccccac--cacct--gtgcaatggcatttcgtatgttgcgtct 848
            |||||||||| ||||||||||    |||||  |||||| |||||| ||||||||||||||
Sbjct: 76   gaagatatttacttagaccccgaggcaccttggtgcaa-ggcattgcgtatgttgcgtct 134

                                                                        
Query: 849  caatggctatgatgtatcttcagatccattttatcaatattctgaagataaattttccaa 908
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 135  caatggctatgatgtatcttcagatccattttatcattattctgaagataaattttccaa 194

                                                                        
Query: 909  -ttccttgaaagggtacttgaaggatgttggtgctattttagagctatatagggcttcac 967
             ||||| ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 195  gttcctggaaagggtactggaaggatgtgggtgctatgttagagctatatagggcttcac 254

                                                                        
Query: 968  aagtcattatacatcctgatgaatcagttttggtgaaacaaagttcctggacaagacagc 1027
            |||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||
Sbjct: 255  aagtcattatacatcctgatgaatcagggtaggtgaaacaaagttcctggacaagacagc 314

                                                                        
Query: 1028 ttctgaagcactattcttcccctcatcgtgtatatgctgataaacttcgtagtcatgttt 1087
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315  ttctgaagcactatccttcccctcatcgtgtatatgctgataaacttcgtagtcatgttt 374

                                                                        
Query: 1088 accacgaggtcaatgaggctcttaattttccttatcattcaaatttggagcgtttgttaa 1147
            |||||||||||||||||||||||| |||||||| ||||||| ||  |||||||  |||||
Sbjct: 375  accacgaggtcaatgaggctcttacttttccttctcattcagatggggagcgtaagttaa 434

                               
Query: 1148 acagaagatcaatagagca 1166
            |||||||||||||||||||
Sbjct: 435  acagaagatcaatagagca 453