Miyakogusa Predicted Gene

Lj3g3v0938200.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0938200.1 CUFF.41730.1
         (1026 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68309 homologue to UniRef100_Q93XA7 Cluster: NAC doma...    72   8e-12
gnl|LJGI|TC68089 similar to UniRef100_A7PGU1 Cluster: Chromosome...    54   2e-06

>gnl|LJGI|TC68309 homologue to UniRef100_Q93XA7 Cluster: NAC domain protein NAC1;
           n=1; Phaseolus vulgaris|Rep: NAC domain protein NAC1 -
           Phaseolus vulgaris (Kidney bean) (French bean), partial
           (94%)
          Length = 1216

 Score = 71.9 bits (36), Expect = 8e-12
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 16  ctcccacctggattcaggttccaccccacagatgaagagcttgt 59
           ||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 135 ctcccacctggattcaggttccatcccagagatgaagagcttgt 178


>gnl|LJGI|TC68089 similar to UniRef100_A7PGU1 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (54%)
          Length = 1230

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 22  cctggattcaggttccaccccacagatgaagagct 56
           ||||||||||||||||| || ||||||||||||||
Sbjct: 199 cctggattcaggttccatcctacagatgaagagct 233