Miyakogusa Predicted Gene
- Lj3g3v0938180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0938180.1 tr|G7IGU5|G7IGU5_MEDTR Strawberry notch-like
protein OS=Medicago truncatula GN=MTR_2g063620 PE=4
SV=,74.63,0,SUBFAMILY NOT NAMED,NULL; STRAWBERRY NOTCH-RELATED,Protein
strawberry notch-like; PHD zinc finger,Zi,CUFF.41728.1
(3648 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO010080 similar to UniRef100_A7QML6 Cluster: Chromosom... 1324 0.0
gnl|LJGI|BP065644 similar to UniRef100_UPI000034F567 Cluster: EM... 559 e-158
>gnl|LJGI|GO010080 similar to UniRef100_A7QML6 Cluster: Chromosome chr19 scaffold_126,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 695
Score = 1324 bits (668), Expect = 0.0
Identities = 689/692 (99%), Gaps = 3/692 (0%)
Strand = Plus / Plus
Query: 2715 aatcaaaggttttataatgcaggcaaaagctgctcttatatctgttggaattgttaggga 2774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcaaaggttttataatgcaggcaaaagctgctcttatatctgttggaattgttaggga 60
Query: 2775 caccattcttggagatgatgaagattctagaaggttatttggtcgaattaccgattcaga 2834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caccattcttggagatgatgaagattctagaaggttatttggtcgaattaccgattcaga 120
Query: 2835 tatgcatgacgttgggcgattcctcaataggcttttgggactgcctcctgacactcaaaa 2894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatgcatgacgttgggcgattcctcaataggcttttgggactgcctcctgacactcaaaa 180
Query: 2895 taagttgtttgagttatttttgaaaatctttgatcttcttattcaaaatgctcggaatga 2954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taagttgtttgagttatttttgaaaatctttgatcttcttattcaaaatgctcggaatga 240
Query: 2955 aggtaacctcgacactggcattgttgacttgaaagctaatgccattgaactgaaagggac 3014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggtaacctcgacactggcattgttgacttgaaagctaatgccattgaactgaaagggac 300
Query: 3015 tcccaagactgtctatgttgatcaaatgagtggggcttccactgttctgttcacattcat 3074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcccaagactgtctatgttgatcaaatgagtggggcttccactgttctgttcacattcat 360
Query: 3075 cttcgatcgtgggatctcatgggagttagcaaataccatgctgaatgagatgcagaagga 3134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttcgatcgtgggatctcatgggagttagcaaataccatgctgaatgagatgcagaagga 420
Query: 3135 tggactgggttcatctaatgatggtttctacaagtccaaaagggagtggctaggaaagcg 3194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggactgggttcatctaatgatggtttctacaagtccaaaagggagtggctaggaaagcg 480
Query: 3195 gcatttcattttagcatttgaaagttctgcttcagctatgtataagataattcgtccccc 3254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcatttcattttagcatttgaaagttctgcttcagctatgtataagataattcgtccccc 540
Query: 3255 tcttggagaatcacctcgggagatgcacctgacagaactaaaaagaaaatataccaaagt 3314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcttggagaatcacctcgggagatgcacctgacagaactaaaaagaaaatataccaaagt 600
Query: 3315 atcaacattagaagaggctcaaactggctggcaagttgaatatcaagcgtcatctaaaca 3374
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 601 atcaacattagaagaggctcaaactggctggcaagttg-atatcaagcg-catctaaaca 658
Query: 3375 gtgcatgcacggtcccaattgtaagcttcgca 3406
|||||||||||||||||||||| |||||||||
Sbjct: 659 gtgcatgcacggtcccaattgt-agcttcgca 689
>gnl|LJGI|BP065644 similar to UniRef100_UPI000034F567 Cluster: EMB1135 (EMBRYO
DEFECTIVE 1135); DNA binding; n=1; Arabidopsis
thaliana|Rep: EMB1135 (EMBRYO DEFECTIVE 1135); DNA
binding - Arabidopsis thaliana, partial (7%)
Length = 297
Score = 559 bits (282), Expect = e-158
Identities = 288/290 (99%)
Strand = Plus / Plus
Query: 260 agctagttgttgaagtggagcgtgatgaagatggtggtggtgtggctggagaaacattta 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 agctagttgttgaagtggagcgtgatgaagatggtggtggtgtggctggagaaacattta 67
Query: 320 tggactatcgacctgccaaggtatctatgggacctccccacccagattctgtcgtggaga 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tggactatcgacctgccaaggtatctatgggacctccccacccagattctgtcgtggaga 127
Query: 380 catcttccttgtctgcagtgccgccacctgagcctacttataatccaaggattaaagatc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 catcttccttgtctgcagtgccgccacctgagcctacttataatccaaggattaaagatc 187
Query: 440 atttggaaagttcgaagactttgtcaagcttgcagattgagacattggtctatgcttgtc 499
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 188 attcggaaagttcgaagactttgtcaagcttgcagattgagacatcggtctatgcttgtc 247
Query: 500 agagacatactcaacaccttcctgatggcactagggcagggttctttatt 549
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agagacatactcaacaccttcctgatggcactagggcagggttctttatt 297