Miyakogusa Predicted Gene
- Lj3g3v0938140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0938140.1 Non Chatacterized Hit- tr|I1KTV2|I1KTV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25709 PE,86,0,seg,NULL;
DNA-glycosylase,DNA glycosylase; Adenine_glyco,Methyladenine
glycosylase; no description,D,CUFF.41779.1
(1200 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60809 similar to UniRef100_A7PN50 Cluster: Chromosome... 1275 0.0
gnl|LJGI|TC72287 similar to UniRef100_A7PN50 Cluster: Chromosome... 801 0.0
gnl|LJGI|TC60020 similar to UniRef100_A7PN50 Cluster: Chromosome... 402 e-111
gnl|LJGI|TC77225 396 e-109
gnl|LJGI|FS335825 similar to UniRef100_A7PN50 Cluster: Chromosom... 186 2e-46
gnl|LJGI|TC59658 similar to UniRef100_A7PFS3 Cluster: Chromosome... 56 5e-07
>gnl|LJGI|TC60809 similar to UniRef100_A7PN50 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 812
Score = 1275 bits (643), Expect = 0.0
Identities = 685/691 (99%), Gaps = 6/691 (0%)
Strand = Plus / Plus
Query: 1 atgtgcagctccaaggccaaagtgactgtaggcatagaagccaccaccaccacaattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atgtgcagctccaaggccaaagtgactgtaggcatagaagccaccaccaccacaattata 187
Query: 61 catccagtggccagaatcaatggcaggcctgtccttcaaccaacttgcaaccgtgttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 catccagtggccagaatcaatggcaggcctgtccttcaaccaacttgcaaccgtgttcca 247
Query: 121 agccttgagaggagaaactcaattaagaaagtgacaccaccaaaatcactttctccacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agccttgagaggagaaactcaattaagaaagtgacaccaccaaaatcactttctccacca 307
Query: 181 tcactcccacttccaaacaaggctttattgacacctccagtttctccaaagtccaagtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcactcccacttccaaacaaggctttattgacacctccagtttctccaaagtccaagtcc 367
Query: 241 cctaggcctcctgctataaagagagccagtgacaataatgggctaaattcaagttctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cctaggcctcctgctataaagagagccagtgacaataatgggctaaattcaagttctgaa 427
Query: 301 aagattgttgtgacaccaagaaactcaataaagactccaactttagagaggaaaaagtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aagattgttgtgacaccaagaaactcaataaagactccaactttagagaggaaaaagtcc 487
Query: 361 aagagttttaaggaagggtcctgtggtattggtcctgtagaggcatctttcagttactct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aagagttttaaggaagggtcctgtggtattggtcctgtagaggcatctttcagttactct 547
Query: 421 tcctctttgatcactgactccccaggaagcatagctgctgtgaggagggaacaggtggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcctctttgatcactgactccccaggaagcatagctgctgtgaggagggaacaggtggca 607
Query: 481 ctgcagcaggcacagaggaaattgaagattgcccattatggaagatcaaagtctgcaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctgcagcaggcacagaggaaattgaagattgcccattatggaagatcaaagtctgcaaag 667
Query: 541 tttgaaagagttgttccttttgatccttcaagcactcttgcatcaaagacaaatgaggag 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 668 tttgaaagagttgttccttttgatccttcaagcactcttgcatcaaagacaaatga-gag 726
Query: 601 gagaagagatgcagctttatcacagtcaattcagatccaatctatatagcttatcatgat 660
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 727 gag-agagatgcagctttatcacagtc-attcagatccaatctatatagcttatcatgat 784
Query: 661 gaagaatggggagttccagttcatgatgaca 691
|||| |||||||| ||||| |||||||||||
Sbjct: 785 gaag-atggggag-tccag-tcatgatgaca 812
>gnl|LJGI|TC72287 similar to UniRef100_A7PN50 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1100
Score = 801 bits (404), Expect = 0.0
Identities = 404/404 (100%)
Strand = Plus / Plus
Query: 797 atgcagaaactgtggctaacttaacggataagcaaatgatgtctattagttcagaatatg 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgcagaaactgtggctaacttaacggataagcaaatgatgtctattagttcagaatatg 60
Query: 857 gcattgaaatcagcaaaattcgaggagtcgttgataatgctaaccaaattttaaaggtta 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcattgaaatcagcaaaattcgaggagtcgttgataatgctaaccaaattttaaaggtta 120
Query: 917 tgaaagactttggttcatttgacaagtacatttgggggtttgtgaatcacaaacctatct 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaagactttggttcatttgacaagtacatttgggggtttgtgaatcacaaacctatct 180
Query: 977 caactcaatacaagtttggccacaagatcccagtgaagacatcaaaatcagaaagcatta 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caactcaatacaagtttggccacaagatcccagtgaagacatcaaaatcagaaagcatta 240
Query: 1037 gcaaagacatggttaggagagggtttaggttcgttggtccaaccgtggttcattcgttta 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaaagacatggttaggagagggtttaggttcgttggtccaaccgtggttcattcgttta 300
Query: 1097 tgcaggcagctggcctcaccaatgaccacttaatcacatgccacaggcacttgcaatgca 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcaggcagctggcctcaccaatgaccacttaatcacatgccacaggcacttgcaatgca 360
Query: 1157 ccttggcagctcgcccccattgtatcatagagccctctccatag 1200
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttggcagctcgcccccattgtatcatagagccctctccatag 404
>gnl|LJGI|TC60020 similar to UniRef100_A7PN50 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 844
Score = 402 bits (203), Expect = e-111
Identities = 203/203 (100%)
Strand = Plus / Plus
Query: 1 atgtgcagctccaaggccaaagtgactgtaggcatagaagccaccaccaccacaattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atgtgcagctccaaggccaaagtgactgtaggcatagaagccaccaccaccacaattata 111
Query: 61 catccagtggccagaatcaatggcaggcctgtccttcaaccaacttgcaaccgtgttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 catccagtggccagaatcaatggcaggcctgtccttcaaccaacttgcaaccgtgttcca 171
Query: 121 agccttgagaggagaaactcaattaagaaagtgacaccaccaaaatcactttctccacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agccttgagaggagaaactcaattaagaaagtgacaccaccaaaatcactttctccacca 231
Query: 181 tcactcccacttccaaacaaggc 203
|||||||||||||||||||||||
Sbjct: 232 tcactcccacttccaaacaaggc 254
Score = 367 bits (185), Expect = e-100
Identities = 185/185 (100%)
Strand = Plus / Plus
Query: 1016 catcaaaatcagaaagcattagcaaagacatggttaggagagggtttaggttcgttggtc 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catcaaaatcagaaagcattagcaaagacatggttaggagagggtttaggttcgttggtc 360
Query: 1076 caaccgtggttcattcgtttatgcaggcagctggcctcaccaatgaccacttaatcacat 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaccgtggttcattcgtttatgcaggcagctggcctcaccaatgaccacttaatcacat 420
Query: 1136 gccacaggcacttgcaatgcaccttggcagctcgcccccattgtatcatagagccctctc 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccacaggcacttgcaatgcaccttggcagctcgcccccattgtatcatagagccctctc 480
Query: 1196 catag 1200
|||||
Sbjct: 481 catag 485
>gnl|LJGI|TC77225
Length = 872
Score = 396 bits (200), Expect = e-109
Identities = 344/392 (87%)
Strand = Plus / Plus
Query: 769 gatttcaggactgcattttcagaatttgatgcagaaactgtggctaacttaacggataag 828
|||||||||||||| ||||||||||||||||||| |||||| || || || || ||||||
Sbjct: 1 gatttcaggactgcgttttcagaatttgatgcagcaactgtagcaaatttcacagataag 60
Query: 829 caaatgatgtctattagttcagaatatggcattgaaatcagcaaaattcgaggagtcgtt 888
|||||| |||||||||||| |||||||||||||| || |||| | || ||||||| |||
Sbjct: 61 caaatggtgtctattagtttggaatatggcattgatataagcagagttagaggagttgtt 120
Query: 889 gataatgctaaccaaattttaaaggttatgaaagactttggttcatttgacaagtacatt 948
||||||||||||||||||||| || |||| || ||||||| ||||||||||| |||||
Sbjct: 121 gataatgctaaccaaattttagagattatcaagaactttggctcatttgacaaatacata 180
Query: 949 tgggggtttgtgaatcacaaacctatctcaactcaatacaagtttggccacaagatccca 1008
||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 181 tggggttttgtgaatcacaaaccaatctccactcaatacaagttcagccacaagatccca 240
Query: 1009 gtgaagacatcaaaatcagaaagcattagcaaagacatggttaggagagggtttaggttc 1068
|| ||||||||||||||||| ||||| |||||||||||| | || || |||||||||||
Sbjct: 241 gtcaagacatcaaaatcagagagcataagcaaagacatgatcagaagggggtttaggttt 300
Query: 1069 gttggtccaaccgtggttcattcgtttatgcaggcagctggcctcaccaatgaccactta 1128
|| || ||||| ||| ||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 301 gtaggcccaacagtgcttcattcatttatgcaggcagctggactcaccaatgaccattta 360
Query: 1129 atcacatgccacaggcacttgcaatgcacctt 1160
|| |||||||||||||||| |||||| ||||
Sbjct: 361 attacatgccacaggcactcccaatgctcctt 392
>gnl|LJGI|FS335825 similar to UniRef100_A7PN50 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 739
Score = 186 bits (94), Expect = 2e-46
Identities = 348/429 (81%), Gaps = 14/429 (3%)
Strand = Plus / Plus
Query: 73 agaatcaatggcaggcctgtccttcaaccaacttgcaaccgtgttccaagccttg---ag 129
||||||||||||||||||||||||||||||||||| || | ||||| | ||||| ||
Sbjct: 313 agaatcaatggcaggcctgtccttcaaccaacttgtaatagagttcctaaccttgttgag 372
Query: 130 aggagaaactcaattaagaaagtgacaccaccaaaatcactttctccaccatcactccca 189
||||||| ||||| ||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 373 gggagaaattcaatcaagaaagtg---ccaccaaagtcactttctccaccatcacttcca 429
Query: 190 cttccaaacaaggctttattgacacctccagtttctccaaagtccaagtcccctaggcct 249
||||||| |||| ||| || ||||| ||| ||||||| || || |||||||| ||||||
Sbjct: 430 cttccaaccaagacttcatctacacccccaatttctcctaaatcaaagtccccaaggcct 489
Query: 250 cctgctataaagagagccagtgacaataatgggctaaattcaagttctgaaaagattgtt 309
| || ||||||||| || ||| | ||||| ||| || |||||||||||||||| ||
Sbjct: 490 tcagcagtaaagagaggcaatgagagtaatgtgctgaactcaagttctgaaaaga---tt 546
Query: 310 gtgacaccaagaaactcaataaagactccaactttagagaggaaaaagtccaagagtttt 369
| || |||| ||| || | || || |||||| | |||||||| |||||||||||||||
Sbjct: 547 gcaaccccaaaaaattccacaagaaccccaactcttgagaggaagaagtccaagagtttt 606
Query: 370 aaggaagggtcctgtggtat-tggtcctgtagaggcatctttcagttactcttcctcttt 428
||||| | ||| | | || | ||| |||||||| || |||||||||||| |||
Sbjct: 607 aagga----tactgccatttctgcttctgctgaggcatcattgagttactcttccaattt 662
Query: 429 gatcactgactccccaggaagcatagctgctgtgaggagggaacaggtggcactgcagca 488
||||||||| ||||||| ||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 663 gatcactgatgccccagggagcatagctgcagtgaggagagaacacatggcactgcagca 722
Query: 489 ggcacagag 497
||||||||
Sbjct: 723 tgcacagag 731
>gnl|LJGI|TC59658 similar to UniRef100_A7PFS3 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 972
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 658 gatgaagaatggggagttccagttcatgatgacaag 693
|||||||||||||||||||| || ||||||||||||
Sbjct: 62 gatgaagaatggggagttccggtacatgatgacaag 97