Miyakogusa Predicted Gene
- Lj3g3v0937900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0937900.1 Non Chatacterized Hit- tr|I1KTU7|I1KTU7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.86,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; seg,NULL;
DEAD,DNA/RNA helicase, DEAD/DEA,CUFF.41682.1
(1688 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66186 similar to UniRef100_Q8W4E1 Cluster: DEAD-box A... 1469 0.0
gnl|LJGI|TC62970 similar to UniRef100_Q8W4E1 Cluster: DEAD-box A... 1065 0.0
gnl|LJGI|FS337066 similar to UniRef100_Q8W4E1 Cluster: DEAD-box ... 571 e-162
>gnl|LJGI|TC66186 similar to UniRef100_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA
helicase 47; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 47 - Arabidopsis thaliana
(Mouse-ear cress), partial (36%)
Length = 996
Score = 1469 bits (741), Expect = 0.0
Identities = 741/741 (100%)
Strand = Plus / Plus
Query: 948 ggctgtgcgccagttaattatggtttctgcaactgtgccattttctgttgtaagagcagc 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgtgcgccagttaattatggtttctgcaactgtgccattttctgttgtaagagcagc 60
Query: 1008 taggagctggggttgtgacccacttcttgtccgagctaacaaagttgtcccacttgaaac 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taggagctggggttgtgacccacttcttgtccgagctaacaaagttgtcccacttgaaac 120
Query: 1068 cgtgtctcctgctgagcctatcaaattgtcaatatcttcacccagctccagtgctaactc 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtgtctcctgctgagcctatcaaattgtcaatatcttcacccagctccagtgctaactc 180
Query: 1128 atccatgcaaactcaggcagcagttgagagtctacctccagcgttgaagcactattactg 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atccatgcaaactcaggcagcagttgagagtctacctccagcgttgaagcactattactg 240
Query: 1188 cgttgttaggttgcagcacaaggttgatacattgagaaggtgtattcatgcgctggatgc 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgttgttaggttgcagcacaaggttgatacattgagaaggtgtattcatgcgctggatgc 300
Query: 1248 caaatatgtgatagctttcatgaaccatactaagcagctaaaggatgttgttttcaagct 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaatatgtgatagctttcatgaaccatactaagcagctaaaggatgttgttttcaagct 360
Query: 1308 ggaggcccgtggaatgacagccacagagttacatggggatcttgggaagcttgcgaggtc 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaggcccgtggaatgacagccacagagttacatggggatcttgggaagcttgcgaggtc 420
Query: 1368 aacaactctgaagaaattcaagaatggtgaggtgagagttctggtgacaaatgaattatc 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacaactctgaagaaattcaagaatggtgaggtgagagttctggtgacaaatgaattatc 480
Query: 1428 tgcaaggggtctggatgtggcagaatgtgatcttgtggttaatctggaattacctacgga 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcaaggggtctggatgtggcagaatgtgatcttgtggttaatctggaattacctacgga 540
Query: 1488 ttcaattcactatgctcaccgggctggccgaactggtcggcttggtaggaatggaacagt 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcaattcactatgctcaccgggctggccgaactggtcggcttggtaggaatggaacagt 600
Query: 1548 gctaactatatgcgaagagcctgaagtttttgttgtgaagaaattgcagaagcagcttgg 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gctaactatatgcgaagagcctgaagtttttgttgtgaagaaattgcagaagcagcttgg 660
Query: 1608 aataccaataccatgttgtgatattacagagggaaagctggttgtcactgaagaagagaa 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aataccaataccatgttgtgatattacagagggaaagctggttgtcactgaagaagagaa 720
Query: 1668 agtactaagtccttcttgaag 1688
|||||||||||||||||||||
Sbjct: 721 agtactaagtccttcttgaag 741
>gnl|LJGI|TC62970 similar to UniRef100_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA
helicase 47; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 47 - Arabidopsis thaliana
(Mouse-ear cress), partial (13%)
Length = 745
Score = 1065 bits (537), Expect = 0.0
Identities = 551/558 (98%)
Strand = Plus / Plus
Query: 1 atgccagctttgatatcagctaagnnnnnnncccttgttggagggtcattcccaatgaga 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 188 atgccagctttgatatcagctaagtttttttcccttgttggagggtcattcccaatgaga 247
Query: 61 agggttttggccaattctaggtttgcttggtttcacagtagtgtccattgtatgagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agggttttggccaattctaggtttgcttggtttcacagtagtgtccattgtatgagcaag 307
Query: 121 ttggaaccccatcatggttctctcactctttctagcattgatgttcaaagtgaagttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttggaaccccatcatggttctctcactctttctagcattgatgttcaaagtgaagttgac 367
Query: 181 cccaagaacagaaccaaattgaataagccttataaggcattgagttcctcctctgagtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cccaagaacagaaccaaattgaataagccttataaggcattgagttcctcctctgagtcc 427
Query: 241 ctcaagaacaaaggaaagccctttggtaataatgagaggaaaccagttagggttttagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctcaagaacaaaggaaagccctttggtaataatgagaggaaaccagttagggttttagat 487
Query: 301 aaacagcaaatagagtctgccccttttgctgcagagtcattttcggaacttggccttccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aaacagcaaatagagtctgccccttttgctgcagagtcattttcggaacttggccttccg 547
Query: 361 aatgtgttgattgacaggctggaaaatgagggtttcaccgttccaacagaggttcagtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aatgtgttgattgacaggctggaaaatgagggtttcaccgttccaacagaggttcagtct 607
Query: 421 gctgcagttcctaccattctgaaggaccatgatgtcatcattcagtcttacactggttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gctgcagttcctaccattctgaaggaccatgatgtcatcattcagtcttacactggttca 667
Query: 481 gggaaaacattggcttatctccttcctatattatctgctatcgggccactaaggaacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gggaaaacattggcttatctccttcctatattatctgctatcgggccactaaggaacaaa 727
Query: 541 gttcctcaaggcagtggt 558
||||||||||||||||||
Sbjct: 728 gttcctcaaggcagtggt 745
>gnl|LJGI|FS337066 similar to UniRef100_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA
helicase 47; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 47 - Arabidopsis thaliana
(Mouse-ear cress), partial (19%)
Length = 773
Score = 571 bits (288), Expect = e-162
Identities = 567/660 (85%), Gaps = 15/660 (2%)
Strand = Plus / Plus
Query: 46 tcattcccaatgagaagggttttggccaattctaggtttgcttggtttcacagtagtgtc 105
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 126 tcattcccaatgagaagggcattggccacttctaggtttgcttggtttcacagtagtgtc 185
Query: 106 cattgtatgagcaagttggaaccccatcatggttctctcactctttctagcattgatgtt 165
||||||| |||| || ||||||||||||||||||| ||||||||||| ||||||| ||
Sbjct: 186 cattgtaggagccaggtggaaccccatcatggttccctcactctttcaagcattggactt 245
Query: 166 caaagtgaagttgaccccaagaacagaaccaaattgaataagccttataaggcattgagt 225
|| |||||| || | ||| | ||||| |||||| ||||| |||| ||
Sbjct: 246 catagtgaaa-------cagcagcagcatcaaat-----aagcctaataagccattaggt 293
Query: 226 tcctcctctgagtccctcaagaacaaaggaaagccctttggtaataatgagaggaaacca 285
||| ||||||| || |||||||||||||||||||| ||||| | |||||||||| |||||
Sbjct: 294 tccacctctgaatctctcaagaacaaaggaaagccatttggcagtaatgagagggaacca 353
Query: 286 gttagggttttagataaaca---gcaaatagagtctgccccttttgctgcagagtcattt 342
||||||||| |||| ||||| |||||||||| |||||||||||||||| ||||||||
Sbjct: 354 gttagggttatagagaaacaacagcaaatagagcctgccccttttgctgccaagtcattt 413
Query: 343 tcggaacttggccttccgaatgtgttgattgacaggctggaaaatgagggtttcaccgtt 402
|| |||||||||||||| ||||||||| |||| ||||| |||||||||||||| | |||
Sbjct: 414 tcagaacttggccttcctaatgtgttggttgagaggctaaaaaatgagggtttcgcggtt 473
Query: 403 ccaacagaggttcagtctgctgcagttcctaccattctgaaggaccatgatgtcatcatt 462
|||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 474 ccaacagaggttcagtgtgctgcagttcctaccattctgaagaaccatgatgttatcatt 533
Query: 463 cagtcttacactggttcagggaaaacattggcttatctccttcctatattatctgctatc 522
|||||| | ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 534 gagtcttggaaaggttcagggaaaacattggcttatctccttcctattttatctgctatt 593
Query: 523 gggccactaaggaacaaagttcctcaaggcagtggtgaaggtggtgattctgggaagaaa 582
|||||||| ||||| || |||||||||| ||| || |||||||| ||| |||||||
Sbjct: 594 gggccactcaggaataagtttcctcaaggagatggcgatggtggtgagcctgcgaagaaa 653
Query: 583 ttgggaattcaagcactgattgttgctccttctagggagcttggaatgcagattgtgagg 642
|||||||| ||||| |||||||||||||||| |||||| ||||||||||||| |||| |
Sbjct: 654 ttgggaatagaagcattgattgttgctccttcgagggagattggaatgcagatagtgatg 713
Query: 643 gaatttgaaaagatactaggaatggataacaagaaggcggttcagcagctagtgggaggc 702
||| |||||||||||||||||| |||||||||| | |||||||||| |||||||||||
Sbjct: 714 gaacttgaaaagatactaggaagcgataacaagagagtggttcagcagttagtgggaggc 773