Miyakogusa Predicted Gene
- Lj3g3v0937820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0937820.1 tr|I1KTT3|I1KTT3_SOYBN Isocitrate dehydrogenase
[NADP] OS=Glycine max GN=Gma.40048 PE=3 SV=1,91.83,0,NADP-SPECIFIC
ISOCITRATE DEHYDROGENASE,Isocitrate dehydrogenase NADP-dependent;
Iso_dh,Isopropylmala,CUFF.41672.1
(1254 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO031382 homologue to UniRef100_O82585 Cluster: NADP-de... 1328 0.0
gnl|LJGI|TC73860 homologue to UniRef100_O82585 Cluster: NADP-dep... 848 0.0
gnl|LJGI|TC58110 homologue to UniRef100_Q06197 Cluster: Isocitra... 289 2e-77
gnl|LJGI|TC67164 homologue to UniRef100_Q06197 Cluster: Isocitra... 264 1e-69
gnl|LJGI|AU089564 homologue to UniRef100_Q7Y0W8 Cluster: NADP-sp... 208 6e-53
gnl|LJGI|BI418182 homologue to UniRef100_Q7Y0W8 Cluster: NADP-sp... 188 6e-47
gnl|LJGI|TC60315 homologue to UniRef100_Q7Y0W7 Cluster: NADP-spe... 66 6e-10
>gnl|LJGI|GO031382 homologue to UniRef100_O82585 Cluster: NADP-dependent isocitrate
dehydrogenase; n=1; Glycine max|Rep: NADP-dependent
isocitrate dehydrogenase - Glycine max (Soybean),
partial (52%)
Length = 808
Score = 1328 bits (670), Expect = 0.0
Identities = 712/718 (99%), Gaps = 6/718 (0%)
Strand = Plus / Plus
Query: 1 atggagtttcggaagataaaggttgacaaccccatcgtcgaaatggacggagatgaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggagtttcggaagataaaggttgacaaccccatcgtcgaaatggacggagatgaaatg 95
Query: 61 acacgagtaatttggaaattgataaaagataagcttattttcccatttttggagctcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 acacgagtaatttggaaattgataaaagataagcttattttcccatttttggagctcgat 155
Query: 121 attaagtattttgaccttggccttcctcatcgggatgccactaatgatagagttaccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 attaagtattttgaccttggccttcctcatcgggatgccactaatgatagagttaccatt 215
Query: 181 gaaagtgctgaagctacactcaagtataatgtagctatcaagtgtgcaactataactcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaaagtgctgaagctacactcaagtataatgtagctatcaagtgtgcaactataactcca 275
Query: 241 gatgaagctcgtgtcaaggagtttaacttgaaacaaatgtggaagagcccaaatgggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gatgaagctcgtgtcaaggagtttaacttgaaacaaatgtggaagagcccaaatgggaca 335
Query: 301 attcgtaacattttaaatggtacagtttttagagaaccgattatctgcaaaaatgttcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 attcgtaacattttaaatggtacagtttttagagaaccgattatctgcaaaaatgttcct 395
Query: 361 cgtcttgtttcaggctggacaaagccaatatgcattggaagacatgcattcggtgaccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cgtcttgtttcaggctggacaaagccaatatgcattggaagacatgcattcggtgaccaa 455
Query: 421 tatcgggcaactgatacaattataagaggaccaggaaagctaaaattggtgtttgaacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tatcgggcaactgatacaattataagaggaccaggaaagctaaaattggtgtttgaacct 515
Query: 481 agtggacatgaagaaattaaagatctagaagtttataacttcgatggtgctggaggtgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agtggacatgaagaaattaaagatctagaagtttataacttcgatggtgctggaggtgta 575
Query: 541 gctttgtccatgtataatactgatgagtccattcaagcttttgctgaggcctcgatgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gctttgtccatgtataatactgatgagtccattcaagcttttgctgaggcctcgatgaac 635
Query: 601 attgcttaccagaaaaaatggcctctctatcttagcactaaaaataccattctcaagaaa 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 636 attgcttaccagaaaaaatggcctctctatcttagcactaaaaataccattctc-agaaa 694
Query: 661 tatgatggaagattcaaggacattttccaggaagtttttgacacacaatggagtcaaa 718
|||||||| ||| |||||||| |||||||||||| ||||||||||| |||||||||||
Sbjct: 695 tatgatgg-aga-tcaaggac-ttttccaggaag-ttttgacacac-atggagtcaaa 747
>gnl|LJGI|TC73860 homologue to UniRef100_O82585 Cluster: NADP-dependent isocitrate
dehydrogenase; n=1; Glycine max|Rep: NADP-dependent
isocitrate dehydrogenase - Glycine max (Soybean), partial
(34%)
Length = 685
Score = 848 bits (428), Expect = 0.0
Identities = 431/432 (99%)
Strand = Plus / Plus
Query: 823 gatggggatgtgcaaagtgatttcatagctcaaggatttggttctcttggcttgatgtca 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatggggatgtgcaaagtgatttcatagctcaaggatttggttctcttggcttgatgtca 60
Query: 883 tcaatactggtttgtccagatgggaaaaccattgaatcagaggcagcccatggcactgtt 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaatactggtttgtccagatgggaaaaccattgaatcagaggcagcccatggcactgtt 120
Query: 943 acccgtcattatcgagttcatcagaagggaggtgaaaccagcacaaacagtattgcttca 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acccgtcattatcgagttcatcagaagggaggtgaaaccagcacaaacagtattgcttca 180
Query: 1003 atttttgcctggtcgcgaggtcttgcacatagggcaaagttggatggaaatgctagattg 1062
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 atttttgcctggtcgcgaggtcttgcacatagggcaaagttggatgggaatgctagattg 240
Query: 1063 tcggactttactgagaaactggaaacagcatgcattggaacagttgaattgggaaagatg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcggactttactgagaaactggaaacagcatgcattggaacagttgaattgggaaagatg 300
Query: 1123 acaaaggatctcgcgcttcttgttcatggacctaaggtttatagatcccagtatttcaat 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaaaggatctcgcgcttcttgttcatggacctaaggtttatagatcccagtatttcaat 360
Query: 1183 actgaagagttcattgatgccgtagcggatcagctgagaacaagattatctacacaagcg 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgaagagttcattgatgccgtagcggatcagctgagaacaagattatctacacaagcg 420
Query: 1243 aagctataaagt 1254
||||||||||||
Sbjct: 421 aagctataaagt 432
>gnl|LJGI|TC58110 homologue to UniRef100_Q06197 Cluster: Isocitrate dehydrogenase
[NADP] (Oxalosuccinate decarboxylase) (IDH)
(NADP(+)-specific ICDH); n=1; Glycine max|Rep:
Isocitrate dehydrogenase [NADP] (Oxalosuccinate
decarboxylase) (IDH) (NADP(+)-specific ICDH) - Glycine
max (Soybean), partial (69%)
Length = 1033
Score = 289 bits (146), Expect = 2e-77
Identities = 353/422 (83%)
Strand = Plus / Plus
Query: 13 aagataaaggttgacaaccccatcgtcgaaatggacggagatgaaatgacacgagtaatt 72
||||| ||||| | |||||||||||| || |||||||||||||||||||| ||||| ||
Sbjct: 101 aagatcaaggtcgccaaccccatcgttgagatggacggagatgaaatgactcgagttatc 160
Query: 73 tggaaattgataaaagataagcttattttcccatttttggagctcgatattaagtatttt 132
||||| | || || |||||||| ||||| || || |||||||| || || ||||| |||
Sbjct: 161 tggaagtcaatcaaggataagctcattttgcccttcttggagctggacatcaagtacttt 220
Query: 133 gaccttggccttcctcatcgggatgccactaatgatagagttaccattgaaagtgctgaa 192
||| | ||||||||| |||| |||| ||| |||||| |||||| |||||||||| |||
Sbjct: 221 gacttgggccttccttatcgtgatgagactgatgataaagttacagttgaaagtgcagaa 280
Query: 193 gctacactcaagtataatgtagctatcaagtgtgcaactataactccagatgaagctcgt 252
|| || || || ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 281 gcaactcttaaatataatgtagcaatcaagtgtgcaactatcactccagatgaagctcgt 340
Query: 253 gtcaaggagtttaacttgaaacaaatgtggaagagcccaaatgggacaattcgtaacatt 312
|| ||||||||| |||| |||||||||| ||| ||||||||||||||| | || |||
Sbjct: 341 gtgaaggagtttggtctgaagcaaatgtggaggagtccaaatgggacaattaggaatatt 400
Query: 313 ttaaatggtacagtttttagagaaccgattatctgcaaaaatgttcctcgtcttgtttca 372
|| ||||| || || || ||||| || ||| | |||||||| || ||||| |||||| |
Sbjct: 401 ttgaatgggactgtcttcagagagccaattctttgcaaaaacgtccctcgccttgttcct 460
Query: 373 ggctggacaaagccaatatgcattggaagacatgcattcggtgaccaatatcgggcaact 432
|| ||||||||| ||||||| |||||||||||||| || ||||||||||||||||| |||
Sbjct: 461 ggttggacaaaggcaatatgtattggaagacatgcttttggtgaccaatatcgggccact 520
Query: 433 ga 434
||
Sbjct: 521 ga 522
Score = 131 bits (66), Expect = 1e-29
Identities = 229/284 (80%)
Strand = Plus / Plus
Query: 532 ggaggtgtagctttgtccatgtataatactgatgagtccattcaagcttttgctgaggcc 591
|||||||| || ||| | ||||| || ||||||||||| |||| |||||||||||||
Sbjct: 620 ggaggtgttgcattggctatgtacaacactgatgagtctattcgttcttttgctgaggct 679
Query: 592 tcgatgaacattgcttaccagaaaaaatggcctctctatcttagcactaaaaataccatt 651
|| ||| | |||||| ||||||||||||| || ||||||||||| |||||||| |||
Sbjct: 680 tccatggcaactgcttatgagaaaaaatggccactttatcttagcaccaaaaatacaatt 739
Query: 652 ctcaagaaatatgatggaagattcaaggacattttccaggaagtttttgacacacaatgg 711
|| ||||||||||||||||||||||||||||| || || ||||||| ||| || ||||
Sbjct: 740 cttaagaaatatgatggaagattcaaggacatatttcaagaagtttatgaggcaggatgg 799
Query: 712 agtcaaaagttcaaagctgcagggatatggtatgaacaccgtcttatagatgatatggtt 771
| |||| | ||||| || || |||||||| || || || ||| ||||||||||
Sbjct: 800 aaatcgaagtatgaggctgctggtatctggtatgagcatcggctcatanatgatatggtg 859
Query: 772 gcgtattctcttaaaagtgatggaggttatgtatgggcctgcaa 815
|| ||| | ||||||| ||| ||||||||||||||||| |||||
Sbjct: 860 gcatatgcacttaaaantgaaggaggttatgtatgggcatgcaa 903
>gnl|LJGI|TC67164 homologue to UniRef100_Q06197 Cluster: Isocitrate dehydrogenase
[NADP] (Oxalosuccinate decarboxylase) (IDH)
(NADP(+)-specific ICDH); n=1; Glycine max|Rep: Isocitrate
dehydrogenase [NADP] (Oxalosuccinate decarboxylase)
(IDH) (NADP(+)-specific ICDH) - Glycine max (Soybean),
partial (95%)
Length = 1651
Score = 264 bits (133), Expect = 1e-69
Identities = 379/461 (82%)
Strand = Plus / Plus
Query: 532 ggaggtgtagctttgtccatgtataatactgatgagtccattcaagcttttgctgaggcc 591
|||||||| || ||| | ||||| || ||||||||||| |||| |||||||||||||
Sbjct: 566 ggaggtgttgcattggctatgtacaacactgatgagtctattcgttcttttgctgaggct 625
Query: 592 tcgatgaacattgcttaccagaaaaaatggcctctctatcttagcactaaaaataccatt 651
|| ||| | |||||| ||||||||||||| || ||||||||||| |||||||| |||
Sbjct: 626 tccatggcaactgcttatgagaaaaaatggccactttatcttagcaccaaaaatacaatt 685
Query: 652 ctcaagaaatatgatggaagattcaaggacattttccaggaagtttttgacacacaatgg 711
|| ||||||||||||||||||||||||||||| || || ||||||| ||| || ||||
Sbjct: 686 cttaagaaatatgatggaagattcaaggacatatttcaagaagtttatgaggcaggatgg 745
Query: 712 agtcaaaagttcaaagctgcagggatatggtatgaacaccgtcttatagatgatatggtt 771
| |||| | ||||| || || |||||||| || || || ||||||||||||||
Sbjct: 746 aaatcgaagtatgaggctgctggtatctggtatgagcatcggctcatagatgatatggtg 805
Query: 772 gcgtattctcttaaaagtgatggaggttatgtatgggcctgcaagaattatgatggggat 831
|| ||| | ||||| ||||| ||||||||||||||||| ||||| || || ||||| |||
Sbjct: 806 gcatatgcacttaagagtgaaggaggttatgtatgggcatgcaaaaactacgatggagat 865
Query: 832 gtgcaaagtgatttcatagctcaaggatttggttctcttggcttgatgtcatcaatactg 891
|| || ||||||||| |||||||||| ||||| || | || |||||| |||| |||||
Sbjct: 866 gtccagagtgatttcttagctcaaggttttggatcattgggtttgatgacatctgtactg 925
Query: 892 gtttgtccagatgggaaaaccattgaatcagaggcagcccatggcactgttacccgtcat 951
||||| || ||||| || ||||||||| |||| |||||||||||||| ||||||||||||
Sbjct: 926 gtttgccctgatggaaagaccattgaagcagaagcagcccatggcacagttacccgtcat 985
Query: 952 tatcgagttcatcagaagggaggtgaaaccagcacaaacag 992
| | | |||||||||||||| || |||||||||||||||||
Sbjct: 986 tttagggttcatcagaagggtggggaaaccagcacaaacag 1026
Score = 216 bits (109), Expect = 3e-55
Identities = 259/309 (83%)
Strand = Plus / Plus
Query: 13 aagataaaggttgacaaccccatcgtcgaaatggacggagatgaaatgacacgagtaatt 72
||||| ||||| | |||||||||||| || |||||||||||||||||||| ||||| ||
Sbjct: 101 aagatcaaggtcgccaaccccatcgttgagatggacggagatgaaatgactcgagttatc 160
Query: 73 tggaaattgataaaagataagcttattttcccatttttggagctcgatattaagtatttt 132
||||| | || || |||||||| ||||| || || |||||||| || || ||||| |||
Sbjct: 161 tggaagtcaatcaaggataagctcattttgcccttcttggagctggacatcaagtacttt 220
Query: 133 gaccttggccttcctcatcgggatgccactaatgatagagttaccattgaaagtgctgaa 192
||| | ||||||||| |||| |||| ||| |||||| |||||| |||||||||| |||
Sbjct: 221 gacttgggccttccttatcgtgatgagactgatgataaagttacagttgaaagtgcagaa 280
Query: 193 gctacactcaagtataatgtagctatcaagtgtgcaactataactccagatgaagctcgt 252
|| || || || ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 281 gcaactcttaaatataatgtagcaatcaagtgtgcaactatcactccagatgaagctcgt 340
Query: 253 gtcaaggagtttaacttgaaacaaatgtggaagagcccaaatgggacaattcgtaacatt 312
|| ||||||||| |||| |||||||||| ||| ||||||||||||||| | || |||
Sbjct: 341 gtgaaggagtttggtctgaagcaaatgtggaggagtccaaatgggacaattaggaatatt 400
Query: 313 ttaaatggt 321
|| ||||||
Sbjct: 401 ttgaatggt 409
Score = 77.8 bits (39), Expect = 1e-13
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 376 tggacaaagccaatatgcattggaagacatgcattcggtgaccaatatcgggcaactga 434
||||||||| ||||||| |||||||||||||| || ||||||||||||||||| |||||
Sbjct: 410 tggacaaaggcaatatgtattggaagacatgcctttggtgaccaatatcgggccactga 468
>gnl|LJGI|AU089564 homologue to UniRef100_Q7Y0W8 Cluster: NADP-specific isocitrate
dehydrogenase; n=1; Lupinus albus|Rep: NADP-specific
isocitrate dehydrogenase - Lupinus albus (White lupin),
partial (26%)
Length = 581
Score = 208 bits (105), Expect = 6e-53
Identities = 257/308 (83%)
Strand = Plus / Plus
Query: 13 aagataaaggttgacaaccccatcgtcgaaatggacggagatgaaatgacacgagtaatt 72
||||| ||||| | |||||||||||| || |||||||||||||||||||| ||||| ||
Sbjct: 87 aagatcaaggtcgccaaccccatcgttgagatggacggagatgaaatgactcgagttatc 146
Query: 73 tggaaattgataaaagataagcttattttcccatttttggagctcgatattaagtatttt 132
||||| | || || |||||||| ||||| || || |||||||| || || ||||| |||
Sbjct: 147 tggaagtcaatcaaggataagctcattttgcccttcttggagctggacatcaagtacttt 206
Query: 133 gaccttggccttcctcatcgggatgccactaatgatagagttaccattgaaagtgctgaa 192
||| | ||||||||| |||| |||| ||| |||||| |||||| |||||||||| |||
Sbjct: 207 gacttgggccttccttatcgtgatgagactgatgataaagttacagttgaaagtgcagaa 266
Query: 193 gctacactcaagtataatgtagctatcaagtgtgcaactataactccagatgaagctcgt 252
|| || || || ||||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 267 gcaactcttaaatataatgtagcaatcaagtgtgcaactatcactccanatgaagctcgt 326
Query: 253 gtcaaggagtttaacttgaaacaaatgtggaagagcccaaatgggacaattcgtaacatt 312
|| ||||||||| |||| |||||||||| ||| ||||||||||||||| | || |||
Sbjct: 327 gtgaaggagtttggtctgaagcaaatgtggaggagtccaaatgggacaattaggaatatt 386
Query: 313 ttaaatgg 320
|| |||||
Sbjct: 387 ttgaatgg 394
>gnl|LJGI|BI418182 homologue to UniRef100_Q7Y0W8 Cluster: NADP-specific isocitrate
dehydrogenase; n=1; Lupinus albus|Rep: NADP-specific
isocitrate dehydrogenase - Lupinus albus (White lupin),
partial (25%)
Length = 421
Score = 188 bits (95), Expect = 6e-47
Identities = 257/311 (82%)
Strand = Plus / Plus
Query: 43 atggacggagatgaaatgacacgagtaatttggaaattgataaaagataagcttattttc 102
||||| |||||||||||||| ||||| || ||||| | || || |||||||| |||||
Sbjct: 106 atggaaggagatgaaatgactcgagttatctggaagtcaatcaaggataagctcattttg 165
Query: 103 ccatttttggagctcgatattaagtattttgaccttggccttcctcatcgggatgccact 162
|| || |||||||| || || ||||| |||||| | ||||||||| |||| |||| |||
Sbjct: 166 cccttcttggagctggacatcaagtactttgacttgggccttccttatcgtgatgagact 225
Query: 163 aatgatagagttaccattgaaagtgctgaagctacactcaagtataatgtagctatcaag 222
|||||| |||||| |||||||||| ||||| || || || ||||||||||| ||||||
Sbjct: 226 gatgataaagttacagttgaaagtgcagaagcaactcttaaatataatgtagcaatcaag 285
Query: 223 tgtgcaactataactccagatgaagctcgtgtcaaggagtttaacttgaaacaaatgtgg 282
||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 286 tgtgcaactatcactccagatgaagctcgtgtgaaggagtttggtctgaagcaaatgtgg 345
Query: 283 aagagcccaaatgggacaattcgtaacattttaaatggtacagtttttagagaaccgatt 342
| ||| ||||||||||||||| | || ||||| ||||| || || || ||||| || |||
Sbjct: 346 aggagtccaaatgggacaattaggaatattttgaatgggactgtcttcagagagccaatt 405
Query: 343 atctgcaaaaa 353
| ||||||||
Sbjct: 406 ctttgcaaaaa 416
Score = 60.0 bits (30), Expect = 4e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 13 aagataaaggttgacaaccccatcgtcgaaatggacggagatgaaatgac 62
||||| ||||| | |||||||||||| || ||||||||||||||||||||
Sbjct: 72 aagatcaaggtcgccaaccccatcgttgagatggacggagatgaaatgac 23
>gnl|LJGI|TC60315 homologue to UniRef100_Q7Y0W7 Cluster: NADP-specific isocitrate
dehydrogenase; n=1; Lupinus albus|Rep: NADP-specific
isocitrate dehydrogenase - Lupinus albus (White lupin),
partial (32%)
Length = 820
Score = 65.9 bits (33), Expect = 6e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 799 tatgtatgggcctgcaagaattatgatggggatgtgcaaagtgatttcatagctcaagga 858
||||| ||||| ||||||||||||||||| ||||| ||||||||||| | ||||||||
Sbjct: 23 tatgtttgggcttgcaagaattatgatggtgatgtccaaagtgatttacttgctcaaggt 82
Query: 859 tttgg 863
|||||
Sbjct: 83 tttgg 87