Miyakogusa Predicted Gene
- Lj3g3v0936580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0936580.1 Non Chatacterized Hit- tr|A2Q3A8|A2Q3A8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,73.88,0,DUF946,Vacuolar protein sorting-associated protein
62; PRE-MRNA PROCESSING-RELATED,NULL; PRE-MRNA PR,CUFF.41657.1
(1746 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72947 weakly similar to UniRef100_A7QR76 Cluster: Chr... 2807 0.0
gnl|LJGI|TC76424 weakly similar to UniRef100_O64861 Cluster: Exp... 125 1e-27
gnl|LJGI|TC73903 similar to UniRef100_A7QR76 Cluster: Chromosome... 56 8e-07
>gnl|LJGI|TC72947 weakly similar to UniRef100_A7QR76 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (68%)
Length = 1473
Score = 2807 bits (1416), Expect = 0.0
Identities = 1432/1436 (99%), Gaps = 1/1436 (0%)
Strand = Plus / Plus
Query: 312 tgaacccaaagacacacctcaaggattctctatgttgggtagctatggccaacccaacaa 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgaacccaaagacacacctcaaggattctctatgttgggtagctatggccaacccaacaa 61
Query: 372 ccagcctctttttggatggattcttgtggcaaaggatgtgtcttcaacttcaagtgcctt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccagcctctttttggatggattcttgtggcaaaggatgtgtcttcaacttcaagtgcctt 121
Query: 432 aaagaaaccacttgattacacacttgtatggaacagtgcatcagtgaaagtttctcaaga 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaagaaaccacttgattacacacttgtatggaacagtgcatcagtgaaagtttctcaaga 181
Query: 492 ttctcctggctatgtttggctaccaaaagcacctgatgggtacaaagctttaggccatgt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttctcctggctatgtttggctaccaaaagcacctgatgggtacaaagctttaggccatgt 241
Query: 552 tgtcaccaccacacctgataaaccttcccttgacaaaatcaagtgtgtcaggcaagacct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgtcaccaccacacctgataaaccttcccttgacaaaatcaagtgtgtcaggcaagacct 301
Query: 612 cactgaacaatgtgaggcctattcatggatttggggaacaggaggagacagtgatccaaa 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cactgaacaatgtgaggcctattcatggatttggggaacaggaggagacagtgatccaaa 361
Query: 672 tagcttcaatttctatgcagttaggccaagcaatagaggaactcaagctcttggtgttgg 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tagcttcaatttctatgcagttaggccaagcaatagaggaactcaagctcttggtgttgg 421
Query: 732 tgtaggagcctttgttgcacaaaatggtgggactaatagctctttatccatcacctgttt 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtaggagcctttgttgcacaaaatggtgggactaatagctctttatccatcacctgttt 481
Query: 792 gaaaaacaccaatgctatttcaaaatctatgcctaatctaaaacaaattggtgcattact 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaaaaacaccaatgctatttcaaaatctatgcctaatctaaaacaaattggtgcattact 541
Query: 852 ccaaacttattctccaattttatacttgcaccctgatgaagaatttcaaccttcctctgt 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccaaacttattctccaattttatacttgcaccctgatgaagaatttcaaccttcctctgt 601
Query: 912 ggattggtttttctccaatggagcattactgtaccagagagggaaagagtcaaatcctgt 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ggattggtttttctccaatggagcattactgtaccagagagggaaagagtcaaatcctgt 661
Query: 972 gaagatagcaccaaatggaaccaaccttcctcaggatcctcacactgatggtgcctattg 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaagatagcaccaaatggaaccaaccttcctcaggatcctcacactgatggtgcctattg 721
Query: 1032 gcttgatctccctgctgatgcagacaacaaagagagggttaaaaaaggagatttgcaaag 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gcttgatctccctgctgatgcagacaacaaagagagggttaaaaaaggagatttgcaaag 781
Query: 1092 ttttgaatcttatgtacatgtgaagccaatgcttggaggaaccttcactgatttagccat 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttttgaatcttatgtacatgtgaagccaatgcttggaggaaccttcactgatttagccat 841
Query: 1152 gtgggtcttctaccctttcaatggaccagcaagagcaaaagtggagttctttaacgtcaa 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gtgggtcttctaccctttcaatggaccagcaagagcaaaagtggagttctttaacgtcaa 901
Query: 1212 attggggaggattggtgaacatgttggtgattgggaacatgtcacattaaggatcagcaa 1271
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 902 attggggaggattggtgaacatgttggtgattgggagcatgtcacattaaggatcagcaa 961
Query: 1272 ttttgatggtcaattatggaaagtctatttcgcacaacatagcaaaggtgcatgggttga 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ttttgatggtcaattatggaaagtctatttcgcacaacatagcaaaggtgcatgggttga 1021
Query: 1332 ttcctctcagattgagttcc-aaagtgacaacaatgtcaataggcctgtggtttattctt 1390
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 ttcctctcagattgagttccaaaagtgacaacaatgtcaataggcctgtggtttattctt 1081
Query: 1391 ctttacatggacatgcttcataccctcatcctggtcttattctgcaagggaaaaatggaa 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ctttacatggacatgcttcataccctcatcctggtcttattctgcaagggaaaaatggaa 1141
Query: 1451 ttggtataaggaatgacactgcaaagagtgcaagtgtattggatatgaggaaatgtgtgt 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 ttggtataaggaatgacactgcaaagagtgcaagtgtattggatatgaggaaatgtgtgt 1201
Query: 1511 tgatttcaacagagtatttggggtcttctgctgttgtggagcctccatggctgaactatt 1570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 tgatttcaacagagtatttggggtcttctgctgttgtggagcctccatggctgaactatt 1261
Query: 1571 tcagggaatgggggccaaaaattgattataatattgatgatgagttgaagaaagtggaga 1630
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1262 tcagggaatgggggccaaaaattgattgtaatattgatgatgagttgaagaaagtggaga 1321
Query: 1631 agtttttgcctgggaagttgaaaactgcttttgaaaatattataaagagtttgccaaatg 1690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 agtttttgcctgggaagttgaaaactgcttttgaaaatattataaagagtttgccaaatg 1381
Query: 1691 aagtgctgggagaggaaggaccaacaggtccaaaggctaagaataattggagtggg 1746
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1382 aagtgctgggagaggaaggaccaacaggcccaaaggctaagaataattggagtggg 1437
>gnl|LJGI|TC76424 weakly similar to UniRef100_O64861 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (26%)
Length = 782
Score = 125 bits (63), Expect = 1e-27
Identities = 126/147 (85%)
Strand = Plus / Plus
Query: 502 tatgtttggctaccaaaagcacctgatgggtacaaagctttaggccatgttgtcaccacc 561
||||||||| |||||| |||||||||||| || ||| | |||||||||||||||||||||
Sbjct: 453 tatgtttggttaccaacagcacctgatggctataaatccttaggccatgttgtcaccacc 512
Query: 562 acacctgataaaccttcccttgacaaaatcaagtgtgtcaggcaagacctcactgaacaa 621
||| | || || ||||||||||||| ||||| |||||||||| ||| ||||| || |||
Sbjct: 513 acagcagagaagccttcccttgacagaatcaggtgtgtcaggtcagatctcacagaccaa 572
Query: 622 tgtgaggcctattcatggatttgggga 648
|||||| | | |||||||||||||||
Sbjct: 573 tgtgagacaaactcatggatttgggga 599
>gnl|LJGI|TC73903 similar to UniRef100_A7QR76 Cluster: Chromosome chr13 scaffold_149,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_149, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1053
Score = 56.0 bits (28), Expect = 8e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1108 catgtgaagccaatgcttggaggaaccttcactgatttagccatgtgggtcttctaccct 1167
|||||||| || ||| |||| ||||| ||||||||| ||||||||||| | ||||| ||
Sbjct: 168 catgtgaaacccatgtttggtggaacattcactgatctagccatgtggattttctatcca 227
Query: 1168 ttcaatgg 1175
||||||||
Sbjct: 228 ttcaatgg 235