Miyakogusa Predicted Gene
- Lj3g3v0936570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0936570.1 Non Chatacterized Hit- tr|A2Q3A8|A2Q3A8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.48,0,DUF946,Vacuolar protein sorting-associated protein
62; PRE-MRNA PROCESSING-RELATED,NULL; PRE-MRNA PR,CUFF.41656.1
(1416 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72947 weakly similar to UniRef100_A7QR76 Cluster: Chr... 2769 0.0
gnl|LJGI|TC76424 weakly similar to UniRef100_O64861 Cluster: Exp... 125 8e-28
gnl|LJGI|TC73903 similar to UniRef100_A7QR76 Cluster: Chromosome... 56 6e-07
>gnl|LJGI|TC72947 weakly similar to UniRef100_A7QR76 Cluster: Chromosome chr13
scaffold_149, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_149, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (68%)
Length = 1473
Score = 2769 bits (1397), Expect = 0.0
Identities = 1413/1417 (99%), Gaps = 1/1417 (0%)
Strand = Plus / Plus
Query: 1 atgttgggtagctatggccaacccaacaaccagcctctttttggatggattcttgtggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atgttgggtagctatggccaacccaacaaccagcctctttttggatggattcttgtggca 92
Query: 61 aaggatgtgtcttcaacttcaagtgccttaaagaaaccacttgattacacacttgtatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aaggatgtgtcttcaacttcaagtgccttaaagaaaccacttgattacacacttgtatgg 152
Query: 121 aacagtgcatcagtgaaagtttctcaagattctcctggctatgtttggctaccaaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aacagtgcatcagtgaaagtttctcaagattctcctggctatgtttggctaccaaaagca 212
Query: 181 cctgatgggtacaaagctttaggccatgttgtcaccaccacacctgataaaccttccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 cctgatgggtacaaagctttaggccatgttgtcaccaccacacctgataaaccttccctt 272
Query: 241 gacaaaatcaagtgtgtcaggcaagacctcactgaacaatgtgaggcctattcatggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gacaaaatcaagtgtgtcaggcaagacctcactgaacaatgtgaggcctattcatggatt 332
Query: 301 tggggaacaggaggagacagtgatccaaatagcttcaatttctatgcagttaggccaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tggggaacaggaggagacagtgatccaaatagcttcaatttctatgcagttaggccaagc 392
Query: 361 aatagaggaactcaagctcttggtgttggtgtaggagcctttgttgcacaaaatggtggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aatagaggaactcaagctcttggtgttggtgtaggagcctttgttgcacaaaatggtggg 452
Query: 421 actaatagctctttatccatcacctgtttgaaaaacaccaatgctatttcaaaatctatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 actaatagctctttatccatcacctgtttgaaaaacaccaatgctatttcaaaatctatg 512
Query: 481 cctaatctaaaacaaattggtgcattactccaaacttattctccaattttatacttgcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cctaatctaaaacaaattggtgcattactccaaacttattctccaattttatacttgcac 572
Query: 541 cctgatgaagaatttcaaccttcctctgtggattggtttttctccaatggagcattactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cctgatgaagaatttcaaccttcctctgtggattggtttttctccaatggagcattactg 632
Query: 601 taccagagagggaaagagtcaaatcctgtgaagatagcaccaaatggaaccaaccttcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 taccagagagggaaagagtcaaatcctgtgaagatagcaccaaatggaaccaaccttcct 692
Query: 661 caggatcctcacactgatggtgcctattggcttgatctccctgctgatgcagacaacaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 caggatcctcacactgatggtgcctattggcttgatctccctgctgatgcagacaacaaa 752
Query: 721 gagagggttaaaaaaggagatttgcaaagttttgaatcttatgtacatgtgaagccaatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gagagggttaaaaaaggagatttgcaaagttttgaatcttatgtacatgtgaagccaatg 812
Query: 781 cttggaggaaccttcactgatttagccatgtgggtcttctaccctttcaatggaccagca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 cttggaggaaccttcactgatttagccatgtgggtcttctaccctttcaatggaccagca 872
Query: 841 agagcaaaagtggagttctttaacgtcaaattggggaggattggtgaacatgttggtgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 agagcaaaagtggagttctttaacgtcaaattggggaggattggtgaacatgttggtgat 932
Query: 901 tgggaacatgtcacattaaggatcagcaattttgatggtcaattatggaaagtctatttc 960
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 tgggagcatgtcacattaaggatcagcaattttgatggtcaattatggaaagtctatttc 992
Query: 961 gcacaacatagcaaaggtgcatgggttgattcctctcagattgagttcc-aaagtgacaa 1019
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 993 gcacaacatagcaaaggtgcatgggttgattcctctcagattgagttccaaaagtgacaa 1052
Query: 1020 caatgtcaataggcctgtggtttattcttctttacatggacatgcttcataccctcatcc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 caatgtcaataggcctgtggtttattcttctttacatggacatgcttcataccctcatcc 1112
Query: 1080 tggtcttattctgcaagggaaaaatggaattggtataaggaatgacactgcaaagagtgc 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 tggtcttattctgcaagggaaaaatggaattggtataaggaatgacactgcaaagagtgc 1172
Query: 1140 aagtgtattggatatgaggaaatgtgtgttgatttcaacagagtatttggggtcttctgc 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 aagtgtattggatatgaggaaatgtgtgttgatttcaacagagtatttggggtcttctgc 1232
Query: 1200 tgttgtggagcctccatggctgaactatttcagggaatgggggccaaaaattgattataa 1259
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1233 tgttgtggagcctccatggctgaactatttcagggaatgggggccaaaaattgattgtaa 1292
Query: 1260 tattgatgatgagttgaagaaagtggagaagtttttgcctgggaagttgaaaactgcttt 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 tattgatgatgagttgaagaaagtggagaagtttttgcctgggaagttgaaaactgcttt 1352
Query: 1320 tgaaaatattataaagagtttgccaaatgaagtgctgggagaggaaggaccaacaggtcc 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1353 tgaaaatattataaagagtttgccaaatgaagtgctgggagaggaaggaccaacaggccc 1412
Query: 1380 aaaggctaagaataattggagtggggatgaagtttga 1416
|||||||||||||||||||||||||||||||||||||
Sbjct: 1413 aaaggctaagaataattggagtggggatgaagtttga 1449
>gnl|LJGI|TC76424 weakly similar to UniRef100_O64861 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (26%)
Length = 782
Score = 125 bits (63), Expect = 8e-28
Identities = 126/147 (85%)
Strand = Plus / Plus
Query: 160 tatgtttggctaccaaaagcacctgatgggtacaaagctttaggccatgttgtcaccacc 219
||||||||| |||||| |||||||||||| || ||| | |||||||||||||||||||||
Sbjct: 453 tatgtttggttaccaacagcacctgatggctataaatccttaggccatgttgtcaccacc 512
Query: 220 acacctgataaaccttcccttgacaaaatcaagtgtgtcaggcaagacctcactgaacaa 279
||| | || || ||||||||||||| ||||| |||||||||| ||| ||||| || |||
Sbjct: 513 acagcagagaagccttcccttgacagaatcaggtgtgtcaggtcagatctcacagaccaa 572
Query: 280 tgtgaggcctattcatggatttgggga 306
|||||| | | |||||||||||||||
Sbjct: 573 tgtgagacaaactcatggatttgggga 599
>gnl|LJGI|TC73903 similar to UniRef100_A7QR76 Cluster: Chromosome chr13 scaffold_149,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_149, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 1053
Score = 56.0 bits (28), Expect = 6e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 766 catgtgaagccaatgcttggaggaaccttcactgatttagccatgtgggtcttctaccct 825
|||||||| || ||| |||| ||||| ||||||||| ||||||||||| | ||||| ||
Sbjct: 168 catgtgaaacccatgtttggtggaacattcactgatctagccatgtggattttctatcca 227
Query: 826 ttcaatgg 833
||||||||
Sbjct: 228 ttcaatgg 235