Miyakogusa Predicted Gene

Lj3g3v0930320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0930320.1 tr|G7K6L7|G7K6L7_MEDTR DNA polymerase OS=Medicago
truncatula GN=MTR_5g017060 PE=3 SV=1,85.52,0,DNA/RNA polymerases,NULL;
zf-DNA_Pol,Zinc finger, DNA-directed DNA polymerase, family B, alpha;
DNA_,CUFF.41632.1
         (1080 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70430 similar to UniRef100_A7PLB6 Cluster: DNA polyme...   452   e-126
gnl|LJGI|AV777775 similar to UniRef100_Q892A6 Cluster: Single-st...   216   2e-55

>gnl|LJGI|TC70430 similar to UniRef100_A7PLB6 Cluster: DNA polymerase; n=1; Vitis
            vinifera|Rep: DNA polymerase - Vitis vinifera (Grape),
            partial (5%)
          Length = 583

 Score =  452 bits (228), Expect = e-126
 Identities = 228/228 (100%)
 Strand = Plus / Plus

                                                                        
Query: 853  agaaagtacactgaagcagacttgtacaagcaactctcatatttctgccatgtattcgat 912
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agaaagtacactgaagcagacttgtacaagcaactctcatatttctgccatgtattcgat 60

                                                                        
Query: 913  actgctagttgtatagaaaagttggaggaaaaatctaggataccagtagagaaagagttg 972
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   actgctagttgtatagaaaagttggaggaaaaatctaggataccagtagagaaagagttg 120

                                                                        
Query: 973  atcaaaattaggccaatagttgacccagtagcatcaacagtacagaagatgagggaccgt 1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atcaaaattaggccaatagttgacccagtagcatcaacagtacagaagatgagggaccgt 180

                                                            
Query: 1033 tgtgcctatggttgggtgaagctggaggacttggtcatttcaatttaa 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgtgcctatggttgggtgaagctggaggacttggtcatttcaatttaa 228


>gnl|LJGI|AV777775 similar to UniRef100_Q892A6 Cluster: Single-stranded-DNA-specific
            exonuclease recJ; n=1; Clostridium tetani|Rep:
            Single-stranded-DNA-specific exonuclease recJ -
            Clostridium tetani, partial (5%)
          Length = 520

 Score =  216 bits (109), Expect = 2e-55
 Identities = 109/109 (100%)
 Strand = Plus / Minus

                                                                        
Query: 972  gatcaaaattaggccaatagttgacccagtagcatcaacagtacagaagatgagggaccg 1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520  gatcaaaattaggccaatagttgacccagtagcatcaacagtacagaagatgagggaccg 461

                                                             
Query: 1032 ttgtgcctatggttgggtgaagctggaggacttggtcatttcaatttaa 1080
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460  ttgtgcctatggttgggtgaagctggaggacttggtcatttcaatttaa 412