Miyakogusa Predicted Gene

Lj3g3v0930310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0930310.1 Non Chatacterized Hit- tr|F6HLJ3|F6HLJ3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.88,6e-19,seg,NULL; VQ,VQ,CUFF.41630.1
         (435 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80788 similar to UniRef100_A7QR91 Cluster: Chromosome...   862   0.0  

>gnl|LJGI|TC80788 similar to UniRef100_A7QR91 Cluster: Chromosome chr13 scaffold_149,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_149, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 730

 Score =  862 bits (435), Expect = 0.0
 Identities = 435/435 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacaaagctgcacacatgttatccaaaatcagcatcttcaaagctaggaattgacaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atgacaaagctgcacacatgttatccaaaatcagcatcttcaaagctaggaattgacaga 168

                                                                       
Query: 61  gattcacacgttatctcgaaactgaagccgaagatccggataattcacatatatgctcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gattcacacgttatctcgaaactgaagccgaagatccggataattcacatatatgctcca 228

                                                                       
Query: 121 gaaatcataaaaactgatgctgcaaatttcagggagctagttcaaagactcacaggaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gaaatcataaaaactgatgctgcaaatttcagggagctagttcaaagactcacaggaaag 288

                                                                       
Query: 181 ccagaagatgaaagcaaatccaagactgcaccaaccaaatccaagaaggccatgatgatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ccagaagatgaaagcaaatccaagactgcaccaaccaaatccaagaaggccatgatgatc 348

                                                                       
Query: 241 atgcaggaagatgaaaaggagtttctgagtctgcaaaatgggacagaagtgaagaatgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 atgcaggaagatgaaaaggagtttctgagtctgcaaaatgggacagaagtgaagaatgaa 408

                                                                       
Query: 301 catcaaattcaagaggaagatgctatgtggagaagaccaaagtcaaatgagaagttcagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 catcaaattcaagaggaagatgctatgtggagaagaccaaagtcaaatgagaagttcagt 468

                                                                       
Query: 361 gatctctttgaggggttctcagaatttgatggttttatggaagtgctaagcaataagtac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gatctctttgaggggttctcagaatttgatggttttatggaagtgctaagcaataagtac 528

                          
Query: 421 tatgccagtggttaa 435
           |||||||||||||||
Sbjct: 529 tatgccagtggttaa 543