Miyakogusa Predicted Gene

Lj3g3v0917040.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0917040.1 Non Chatacterized Hit- tr|D8TCR5|D8TCR5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,37.19,0.00000000000004,SUBFAMILY NOT NAMED,NULL; RAB3-GAP
REGULATORY DOMAIN,Protein N-terminal asparagine
amidohydrolase,CUFF.41614.1
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66321 similar to UniRef100_A7QRA3 Cluster: Chromosome...   285   1e-76
gnl|LJGI|FS355003 weakly similar to UniRef100_O64876 Cluster: Ex...   206   8e-53

>gnl|LJGI|TC66321 similar to UniRef100_A7QRA3 Cluster: Chromosome chr13 scaffold_149,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_149, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (52%)
          Length = 800

 Score =  285 bits (144), Expect = 1e-76
 Identities = 144/144 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgtgttcttgggcataataccagaaaggattctgatggaaaaacttaccccattttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 atgtgtgttcttgggcataataccagaaaggattctgatggaaaaacttaccccattttt 716

                                                                       
Query: 61  aatggatttgtggtggagactgcaaccggagttgttatcccagcaagttttgatagaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aatggatttgtggtggagactgcaaccggagttgttatcccagcaagttttgatagaagc 776

                                   
Query: 121 tctagatgtcccgatgaagttgtc 144
           ||||||||||||||||||||||||
Sbjct: 777 tctagatgtcccgatgaagttgtc 800


>gnl|LJGI|FS355003 weakly similar to UniRef100_O64876 Cluster: Expressed protein; n=1;
           Arabidopsis thaliana|Rep: Expressed protein -
           Arabidopsis thaliana, partial (12%)
          Length = 458

 Score =  206 bits (104), Expect = 8e-53
 Identities = 104/104 (100%)
 Strand = Plus / Minus

                                                                       
Query: 341 agggcccagattttgtggataatttaaaaaggcaatggaattatttgattgagcatccat 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agggcccagattttgtggataatttaaaaaggcaatggaattatttgattgagcatccat 399

                                                       
Query: 401 actggacagaaaccttccccaagagacagcctcgagtttttgca 444
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 actggacagaaaccttccccaagagacagcctcgagtttttgca 355