Miyakogusa Predicted Gene
- Lj3g3v0896950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0896950.1 Non Chatacterized Hit- tr|C0HDR7|C0HDR7_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,39.89,3e-16,coiled-coil,NULL; seg,NULL,CUFF.41621.1
(1077 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82360 similar to UniRef100_A7QRC5 Cluster: Chromosome... 1281 0.0
gnl|LJGI|GO030783 similar to UniRef100_A7QRC5 Cluster: Chromosom... 674 0.0
gnl|LJGI|GO028387 similar to UniRef100_A7QRC5 Cluster: Chromosom... 591 e-168
>gnl|LJGI|TC82360 similar to UniRef100_A7QRC5 Cluster: Chromosome chr13 scaffold_149,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr13 scaffold_149, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 694
Score = 1281 bits (646), Expect = 0.0
Identities = 677/692 (97%)
Strand = Plus / Plus
Query: 169 tatgatgaaccatctagccagcatatgtcatcaaaacatgatagagttcatctggaaaat 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tatgatgaaccatctagccagcatatgtcatcaaaacatgatagagttcatctggaaaat 62
Query: 229 gatcaagtacctnnnnnnnttaatactaacaaagggggtaccacacaaactcatactgta 288
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gatcaagtacctaaaaaaattaatactaacaaagggggtaccacacaaactcatactgta 122
Query: 289 aaaagcagtgtacatggaaaacctcacaagccagataccaaatcttccaaggacttcgaa 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aaaagcagtgtacatggaaaacctcacaagccagataccaaatcttccaaggacttcgaa 182
Query: 349 ataaannnnnnncaggacaaagataatgcaaatcagaggcgagtgtcaaatatggagaat 408
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ataaatttttttcaggacaaagataatgcaaatcagaggcgagtgtcaaatatggagaat 242
Query: 409 aatactaactttcaagaccaggcttttaatacttttgttgctgaatttgataccactaag 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aatactaactttcaagaccaggcttttaatacttttgttgctgaatttgataccactaag 302
Query: 469 ctcaactctgggcttggtaacaaatctgaaagggaagaagcattagaggctgaggtggag 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctcaactctgggcttggtaacaaatctgaaagggaagaagcattagaggctgaggtggag 362
Query: 529 aaactcagagagcagctgaaggaagctaacttggagaaagctgaaataacttcaaagtat 588
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aaactcagagaacagctgaaggaagctaacttggagaaagctgaaataacttcaaagtat 422
Query: 589 gaaaagctttctgctatttgcagatcccaaaggcaagaattgcaggatctcaagcaagca 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaaagctttctgctatttgcagatcccaaaggcaagaattgcaggatctcaagcaagca 482
Query: 649 cttgcaacaaggactccatcacagagtagagagggtttaaaaacttctcctggaattacc 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cttgcaacaaggactccatcacagagtagagagggtttaaaaacttctcctggaattacc 542
Query: 709 tcatctccatctgagctgcagaggcagaagattggtgggactgcagaaagtgaattgaaa 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tcatctccatctgagctgcagaggcagaagattggtgggactgcagaaagtgaattgaaa 602
Query: 769 actcctagttcagaaccaaagtcatggcaagcttttccggaggaacctggaccagtaaag 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 actcctagttcagaaccaaagtcatggcaagcttttccggaggaacctggaccagtaaag 662
Query: 829 tccctttcagctgacaatgctacaaaatctgt 860
||||||||||||||||||||||||||||||||
Sbjct: 663 tccctttcagctgacaatgctacaaaatctgt 694
>gnl|LJGI|GO030783 similar to UniRef100_A7QRC5 Cluster: Chromosome chr13 scaffold_149,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr13 scaffold_149, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 892
Score = 674 bits (340), Expect = 0.0
Identities = 352/356 (98%)
Strand = Plus / Minus
Query: 722 agctgcagaggcagaagattggtgggactgcagaaagtgaattgaaaactcctagttcag 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agctgcagaggcagaagattggtgggactgcagaaagtgaattgaaaactcctagttcag 445
Query: 782 aaccaaagtcatggcaagcttttccggaggaacctggaccagtaaagtccctttcagctg 841
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 aaccaaagtcatggcaagcctttccggaggaacctggaccagtgaagtccctttcagctg 385
Query: 842 acaatgctacaaaatctgtcaggacaaaaaatggtccccagaacaagcaacctactcaac 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaatgctacaaaatctgtcaggacaaaaaatggtccccagaacaagcaacctactcaac 325
Query: 902 tagcttctgactttgattcatggggttttggcgcagataagttcagtgctgtacgtgctg 961
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 taacttctgactttgattcatggggttttagcgcagataagttcagtgctgtacgtgctg 265
Query: 962 gaagccctcagatgccaagacctggtgaagggagtaaagctcagctttttggtaatccaa 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaagccctcagatgccaagacctggtgaagggagtaaagctcagctttttggtaatccaa 205
Query: 1022 aggcctctgagagcaagtcagcttctcaaccagccggatgggcaggcttttagcta 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aggcctctgagagcaagtcagcttctcaaccagccggatgggcaggcttttagcta 149
Score = 557 bits (281), Expect = e-158
Identities = 293/296 (98%), Gaps = 2/296 (0%)
Strand = Plus / Minus
Query: 428 aggcttttaatacttttgttgctgaatttgataccactaagctcaactctgggcttggta 487
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 aggcttttaatactttg--tgctgaatttgataccactaagctcaactctgggcttggta 835
Query: 488 acaaatctgaaagggaagaagcattagaggctgaggtggagaaactcagagagcagctga 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 acaaatctgaaagggaagaagcattagaggctgaggtggagaaactcagagagcagctga 775
Query: 548 aggaagctaacttggagaaagctgaaataacttcaaagtatgaaaagctttctgctattt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aggaagctaacttggagaaagctgaaataacttcaaagtatgaaaagctttctgctattt 715
Query: 608 gcagatcccaaaggcaagaattgcaggatctcaagcaagcacttgcaacaaggactccat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gcagatcccaaaggcaagaattgcaggatctcaagcaagcacttgcaacaaggactccat 655
Query: 668 cacagagtagagagggtttaaaaacttctcctggaattacctcatctccatctgag 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cacagagtagagagggtttaaaaacttctcctggaattacctcatctccatctgag 599
>gnl|LJGI|GO028387 similar to UniRef100_A7QRC5 Cluster: Chromosome chr13 scaffold_149,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr13 scaffold_149, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 916
Score = 591 bits (298), Expect = e-168
Identities = 298/298 (100%)
Strand = Plus / Minus
Query: 780 agaaccaaagtcatggcaagcttttccggaggaacctggaccagtaaagtccctttcagc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agaaccaaagtcatggcaagcttttccggaggaacctggaccagtaaagtccctttcagc 358
Query: 840 tgacaatgctacaaaatctgtcaggacaaaaaatggtccccagaacaagcaacctactca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tgacaatgctacaaaatctgtcaggacaaaaaatggtccccagaacaagcaacctactca 298
Query: 900 actagcttctgactttgattcatggggttttggcgcagataagttcagtgctgtacgtgc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 actagcttctgactttgattcatggggttttggcgcagataagttcagtgctgtacgtgc 238
Query: 960 tggaagccctcagatgccaagacctggtgaagggagtaaagctcagctttttggtaatcc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 tggaagccctcagatgccaagacctggtgaagggagtaaagctcagctttttggtaatcc 178
Query: 1020 aaaggcctctgagagcaagtcagcttctcaaccagccggatgggcaggcttttagcta 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aaaggcctctgagagcaagtcagcttctcaaccagccggatgggcaggcttttagcta 120
Score = 87.7 bits (44), Expect = 1e-16
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 1 atgcctcgaaggaatccacctcctccaccttcagttgtagaacc 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atgcctcgaaggaatccacctcctccaccttcagttgtagaacc 412