Miyakogusa Predicted Gene
- Lj3g3v0882650.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0882650.1 Non Chatacterized Hit- tr|B7FH81|B7FH81_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,83.33,0,seg,NULL; coiled-coil,NULL; no
description,Translation protein SH3-like, subgroup; 60S RIBOSOMAL
PRO,CUFF.41587.1
(699 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57502 similar to UniRef100_A7QWX2 Cluster: 60S riboso... 920 0.0
gnl|LJGI|TC65745 similar to UniRef100_Q9M3Z0 Cluster: 60S riboso... 341 4e-93
gnl|LJGI|TC67105 similar to UniRef100_Q9M3Z0 Cluster: 60S riboso... 305 2e-82
gnl|LJGI|TC57281 similar to UniRef100_A7QWX2 Cluster: 60S riboso... 305 2e-82
gnl|LJGI|BW599605 similar to UniRef100_Q9M3Z0 Cluster: 60S ribos... 206 1e-52
gnl|LJGI|TC79572 similar to UniRef100_Q9M3Z0 Cluster: 60S riboso... 113 1e-24
gnl|LJGI|TC64934 similar to UniRef100_P34091 Cluster: 60S riboso... 76 3e-13
>gnl|LJGI|TC57502 similar to UniRef100_A7QWX2 Cluster: 60S ribosomal protein L6; n=1;
Vitis vinifera|Rep: 60S ribosomal protein L6 - Vitis
vinifera (Grape), partial (97%)
Length = 960
Score = 920 bits (464), Expect = 0.0
Identities = 494/504 (98%)
Strand = Plus / Plus
Query: 196 gctgatgatgtcaagaagcctctcctcaacaagcataagcccaaacccacaaaactcagg 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gctgatgatgtcaagaagcctctcctcaacaagcataagcccaaacccacaaaactcagg 286
Query: 256 gctagtatttcgccggggacagtgctgattctgcttgctgggagatttaaggggaagagg 315
||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 287 gctagcattttgccggggacggtgctgattctgcttgctgggagatttaaggggaaaagg 346
Query: 316 gttgttttcctgaagcagcttccatctgggttgcttcttgtcacaggtccatttaagatc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gttgttttcctgaagcagcttccatctgggttgcttcttgtcacaggtccatttaagatc 406
Query: 376 aatggagttcctttgagaagggtgaatcaatcttatgtcattggtacatccaccaaagtg 435
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 407 aatggagttcctttgagaagggtgaatcaatcttatgtcattggtacgtccaccaaagtg 466
Query: 436 gatatttccggtgttaatgttgataagttcaatgacgagtactttgttaaggaagcccag 495
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 467 gatatttccggtgttaatgttgataaattcaatgacgagtactttgttaaggaagcccag 526
Query: 496 aaaaagaaacagaagggagaaggcgagttctttgaggcagagaaggaggagaaaaatgag 555
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 527 aaaaagaaacagaagggagaaggcgagttcttcgaggcagagaaggaggagaaaaatgag 586
Query: 556 cttccacaagaaaagagagatgcccaaagtactgtggactctgcaatattgaaggccatt 615
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 587 cttccacaagaaaagagagatgcccaaagtacagtggactctgcaatattgaaagccatt 646
Query: 616 gatagtgttccggacctgaagtcttacctgggtgctaggttttctttaaagtcaggaatg 675
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gagagtgttccggacctgaagtcttacctgggtgctaggttttctttaaagtcaggaatg 706
Query: 676 aagccacatgagctagtcttctag 699
||||||||||||||||||||||||
Sbjct: 707 aagccacatgagctagtcttctag 730
Score = 260 bits (131), Expect = 1e-68
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 atggcgccgagaaaaaccccaagggtgacaaggaaccctgatttgatcaggggaatcggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 atggcgccgagaaaaaccccaagggtgacaaggaaccctgatttgatcaggggaatcggc 91
Query: 61 aagtactcaaggtcccagatgtaccacaagaaaggcatctgggccatcaaggccaaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 aagtactcaaggtcccagatgtaccacaagaaaggcatctgggccatcaaggccaaaaac 151
Query: 121 ggcggcgtttt 131
|||||||||||
Sbjct: 152 ggcggcgtttt 162
>gnl|LJGI|TC65745 similar to UniRef100_Q9M3Z0 Cluster: 60S ribosomal protein L6; n=1;
Cicer arietinum|Rep: 60S ribosomal protein L6 - Cicer
arietinum (Chickpea) (Garbanzo), complete
Length = 999
Score = 341 bits (172), Expect = 4e-93
Identities = 421/504 (83%)
Strand = Plus / Plus
Query: 196 gctgatgatgtcaagaagcctctcctcaacaagcataagcccaaacccacaaaactcagg 255
||||||||||| |||||||| || || |||||||||||||| | |||||| || ||||||
Sbjct: 254 gctgatgatgttaagaagccccttcttaacaagcataagcctagacccactaagctcagg 313
Query: 256 gctagtatttcgccggggacagtgctgattctgcttgctgggagatttaaggggaagagg 315
||||| ||| | || |||||||| |||||||| ||||||||||| |||||||| ||||||
Sbjct: 314 gctagcattactcctgggacagttctgattcttcttgctgggaggtttaagggaaagagg 373
Query: 316 gttgttttcctgaagcagcttccatctgggttgcttcttgtcacaggtccatttaagatc 375
||||| || ||||||||||||| |||||||||||||| || || ||||| | ||||||
Sbjct: 374 gttgtgtttttgaagcagcttccttctgggttgcttctggtaactggtccttacaagatc 433
Query: 376 aatggagttcctttgagaagggtgaatcaatcttatgtcattggtacatccaccaaagtg 435
|||||||||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 434 aatggagttcctttgagaagagtgaatcagtcctatgtgattggcacatcaaccaaagta 493
Query: 436 gatatttccggtgttaatgttgataagttcaatgacgagtactttgttaaggaagcccag 495
||| | || | |||||| || ||||| || ||||| |||||||| ||||||||||||
Sbjct: 494 gatgtatctgctgttaacgtggataaatttgatgacaagtacttttcaaaggaagcccag 553
Query: 496 aaaaagaaacagaagggagaaggcgagttctttgaggcagagaaggaggagaaaaatgag 555
|| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 554 aagaagaagaagaagggagaaggagagttctttgaggcagagaaagaggagaaaaatgca 613
Query: 556 cttccacaagaaaagagagatgcccaaagtactgtggactctgcaatattgaaggccatt 615
| || || || |||| ||||| ||| | |||||||||||| || | | | ||||||
Sbjct: 614 ttgcctcaggagaagaaagatgaccagaaaactgtggactcttcattgataacagccatt 673
Query: 616 gatagtgttccggacctgaagtcttacctgggtgctaggttttctttaaagtcaggaatg 675
|| ||||||| || ||||| |||| || ||||||||||||||| | ||||| || |||
Sbjct: 674 gagggtgttccagagttgaaggcttatctcggtgctaggttttctcttaagtctggcatg 733
Query: 676 aagccacatgagctagtcttctag 699
||||||||||||||| ||||||||
Sbjct: 734 aagccacatgagctactcttctag 757
Score = 99.6 bits (50), Expect = 2e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 34 aaccctgatttgatcaggggaatcggcaagtactcaaggtcccagatgtaccacaagaaa 93
||||| |||||||| ||||||||||| |||||||| | ||| ||||||||||||||||
Sbjct: 92 aaccccgatttgataaggggaatcggaaagtactcgaagtcgcagatgtaccacaagagg 151
Query: 94 ggcatctgggccatcaaggccaaaaacggcggcg 127
|| |||||||| |||||||||||||||||||||
Sbjct: 152 ggtatctgggctctcaaggccaaaaacggcggcg 185
>gnl|LJGI|TC67105 similar to UniRef100_Q9M3Z0 Cluster: 60S ribosomal protein L6; n=1;
Cicer arietinum|Rep: 60S ribosomal protein L6 - Cicer
arietinum (Chickpea) (Garbanzo), partial (81%)
Length = 736
Score = 305 bits (154), Expect = 2e-82
Identities = 307/358 (85%)
Strand = Plus / Plus
Query: 196 gctgatgatgtcaagaagcctctcctcaacaagcataagcccaaacccacaaaactcagg 255
||||||||||| |||||||| || || |||||||||||||| | |||||| || ||||||
Sbjct: 371 gctgatgatgttaagaagccccttcttaacaagcataagcctagacccactaagctcagg 430
Query: 256 gctagtatttcgccggggacagtgctgattctgcttgctgggagatttaaggggaagagg 315
||||| ||| | || |||||||| |||||||| ||||||||||| |||||||| ||||||
Sbjct: 431 gctagcattactcctgggacagttctgattcttcttgctgggaggtttaagggaaagagg 490
Query: 316 gttgttttcctgaagcagcttccatctgggttgcttcttgtcacaggtccatttaagatc 375
||||| || ||||||||||||| |||||||||||||| || || ||||| | ||||||
Sbjct: 491 gttgtgtttttgaagcagcttccttctgggttgcttctggtaactggtccttacaagatc 550
Query: 376 aatggagttcctttgagaagggtgaatcaatcttatgtcattggtacatccaccaaagtg 435
|||||||||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 551 aatggagttcctttgagaagagtgaatcagtcctatgtgattggcacatcaaccaaagta 610
Query: 436 gatatttccggtgttaatgttgataagttcaatgacgagtactttgttaaggaagcccag 495
||| | || | |||||| || ||||| || ||||| |||||||| ||||||||||||
Sbjct: 611 gatgtatctgctgttaacgtggataaatttgatgacaagtacttttcaaaggaagcccag 670
Query: 496 aaaaagaaacagaagggagaaggcgagttctttgaggcagagaaggaggagaaaaatg 553
|| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 671 aagaagaagaagaagggagaaggagagttctttgaggcagagaaagaggagaaaaatg 728
Score = 99.6 bits (50), Expect = 2e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 34 aaccctgatttgatcaggggaatcggcaagtactcaaggtcccagatgtaccacaagaaa 93
||||| |||||||| ||||||||||| |||||||| | ||| ||||||||||||||||
Sbjct: 209 aaccccgatttgataaggggaatcggaaagtactcgaagtcgcagatgtaccacaagagg 268
Query: 94 ggcatctgggccatcaaggccaaaaacggcggcg 127
|| |||||||| |||||||||||||||||||||
Sbjct: 269 ggtatctgggctctcaaggccaaaaacggcggcg 302
>gnl|LJGI|TC57281 similar to UniRef100_A7QWX2 Cluster: 60S ribosomal protein L6; n=1;
Vitis vinifera|Rep: 60S ribosomal protein L6 - Vitis
vinifera (Grape), complete
Length = 940
Score = 305 bits (154), Expect = 2e-82
Identities = 409/494 (82%)
Strand = Plus / Plus
Query: 196 gctgatgatgtcaagaagcctctcctcaacaagcataagcccaaacccacaaaactcagg 255
||||||||||||||||||||||| |||||||| || || |||| |||||| || ||||||
Sbjct: 242 gctgatgatgtcaagaagcctctgctcaacaaacacaaacccagacccaccaagctcagg 301
Query: 256 gctagtatttcgccggggacagtgctgattctgcttgctgggagatttaaggggaagagg 315
||||| ||| | || ||||| |||||||| ||||||| || ||||| ||||||||||||
Sbjct: 302 gctagcattacccctgggactgtgctgatcttgcttgcaggcagattcaaggggaagagg 361
Query: 316 gttgttttcctgaagcagcttccatctgggttgcttcttgtcacaggtccatttaagatc 375
||||| || |||| ||||||||| ||||||||||||||||| || ||||| || |||||
Sbjct: 362 gttgtgtttctgaggcagcttccttctgggttgcttcttgtgactggtcccttcaagatt 421
Query: 376 aatggagttcctttgagaagggtgaatcaatcttatgtcattggtacatccaccaaagtg 435
|||||||||||||||||| | |||||||| || ||||| |||| ||||| ||||||||
Sbjct: 422 aatggagttcctttgagacgtgtgaatcagtcctatgtgattgccacatctaccaaagta 481
Query: 436 gatatttccggtgttaatgttgataagttcaatgacgagtactttgttaaggaagcccag 495
||| | || | || || ||||| || ||||| | |||||| ||||||||||||
Sbjct: 482 gatgtctctgcagtcaagtcggataaatttgatgacaaatacttttcaaaggaagcccag 541
Query: 496 aaaaagaaacagaagggagaaggcgagttctttgaggcagagaaggaggagaaaaatgag 555
||||||||| |||||||||| || ||||||||||| ||||| |||||||||||||||| |
Sbjct: 542 aaaaagaaaaagaagggagagggagagttctttgaagcagacaaggaggagaaaaatgtg 601
Query: 556 cttccacaagaaaagagagatgcccaaagtactgtggactctgcaatattgaaggccatt 615
|| || || || |||| |||| ||||| ||||| || |||||| | || | |||||
Sbjct: 602 ctcccccaggagaagaaggatgaccaaaaaactgttgattctgcattgttaaccgccatc 661
Query: 616 gatagtgttccggacctgaagtcttacctgggtgctaggttttctttaaagtcaggaatg 675
|| |||||||| ||||||||||||||||| ||||| |||||||| || ||||| || |||
Sbjct: 662 gagagtgttccagacctgaagtcttacctaggtgccaggttttccttgaagtctggcatg 721
Query: 676 aagccacatgagct 689
||||| ||||||||
Sbjct: 722 aagcctcatgagct 735
Score = 97.6 bits (49), Expect = 9e-20
Identities = 82/93 (88%)
Strand = Plus / Plus
Query: 34 aaccctgatttgatcaggggaatcggcaagtactcaaggtcccagatgtaccacaagaaa 93
|||||||| ||||||||||||||||| || ||||| |||||| |||||||||||||||
Sbjct: 80 aaccctgaattgatcaggggaatcgggaaatactccaggtccaagatgtaccacaagagg 139
Query: 94 ggcatctgggccatcaaggccaaaaacggcggc 126
|| ||||||||||||||||||| ||||||||
Sbjct: 140 ggtctctgggccatcaaggccaagcacggcggc 172
>gnl|LJGI|BW599605 similar to UniRef100_Q9M3Z0 Cluster: 60S ribosomal protein L6; n=1;
Cicer arietinum|Rep: 60S ribosomal protein L6 - Cicer
arietinum (Chickpea) (Garbanzo), partial (51%)
Length = 494
Score = 206 bits (104), Expect = 1e-52
Identities = 252/300 (84%), Gaps = 1/300 (0%)
Strand = Plus / Plus
Query: 196 gctgatgatgtcaagaagcctctcctc-aacaagcataagcccaaacccacaaaactcag 254
||||||||||| |||||||| || || |||||||||||||| | |||||| || |||||
Sbjct: 194 gctgatgatgttaagaagccccttctataacaagcataagcctagacccactaagctcag 253
Query: 255 ggctagtatttcgccggggacagtgctgattctgcttgctgggagatttaaggggaagag 314
|||||| ||| | || |||||||| |||||||| ||||||||||| ||||| || |||||
Sbjct: 254 ggctagcattactcctgggacagttctgattcttcttgctgggaggtttaacggaaagag 313
Query: 315 ggttgttttcctgaagcagcttccatctgggttgcttcttgtcacaggtccatttaagat 374
|||||| || ||||||||||||| ||||||||||||| || || ||||| | |||||
Sbjct: 314 ggttgtgtttttgaagcagcttccttctgggttgcttcaggtaactggtccttacaagat 373
Query: 375 caatggagttcctttgagaagggtgaatcaatcttatgtcattggtacatccaccaaagt 434
||||||||||||||||||||| ||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 374 caatggagttcctttgagaagagtgaatcaatcctatgtgattggcacatcaaccaaagt 433
Query: 435 ggatatttccggtgttaatgttgataagttcaatgacgagtactttgttaaggaagccca 494
||| | || | |||||| || ||||| || ||||| |||||||| |||||||||||
Sbjct: 434 agatgtatctgctgttaacgtggataaatttgatgacaagtacttttcaaaggaagccca 493
>gnl|LJGI|TC79572 similar to UniRef100_Q9M3Z0 Cluster: 60S ribosomal protein L6; n=1;
Cicer arietinum|Rep: 60S ribosomal protein L6 - Cicer
arietinum (Chickpea) (Garbanzo), partial (46%)
Length = 468
Score = 113 bits (57), Expect = 1e-24
Identities = 108/125 (86%)
Strand = Plus / Plus
Query: 196 gctgatgatgtcaagaagcctctcctcaacaagcataagcccaaacccacaaaactcagg 255
||||||||||||||||||||||| |||||||| || || |||| |||||| || ||||||
Sbjct: 336 gctgatgatgtcaagaagcctctgctcaacaaacacaaacccagacccaccaagctcagg 395
Query: 256 gctagtatttcgccggggacagtgctgattctgcttgctgggagatttaaggggaagagg 315
||||| ||| | || ||||| |||||||| ||||||| || ||||| ||||||||||||
Sbjct: 396 gctagcattacccctgggactgtgctgatcttgcttgcaggcagattcaaggggaagagg 455
Query: 316 gttgt 320
|||||
Sbjct: 456 gttgt 460
Score = 97.6 bits (49), Expect = 9e-20
Identities = 82/93 (88%)
Strand = Plus / Plus
Query: 34 aaccctgatttgatcaggggaatcggcaagtactcaaggtcccagatgtaccacaagaaa 93
|||||||| ||||||||||||||||| || ||||| |||||| |||||||||||||||
Sbjct: 174 aaccctgaattgatcaggggaatcgggaaatactccaggtccaagatgtaccacaagagg 233
Query: 94 ggcatctgggccatcaaggccaaaaacggcggc 126
|| ||||||||||||||||||| ||||||||
Sbjct: 234 ggtctctgggccatcaaggccaagcacggcggc 266
>gnl|LJGI|TC64934 similar to UniRef100_P34091 Cluster: 60S ribosomal protein L6; n=1;
Mesembryanthemum crystallinum|Rep: 60S ribosomal protein
L6 - Mesembryanthemum crystallinum (Common ice plant),
partial (21%)
Length = 674
Score = 75.8 bits (38), Expect = 3e-13
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 610 gccattgatagtgttccggacctgaagtcttacctgggtgctaggttttctttaaagtca 669
|||||||| ||||||| || ||||| |||| || ||||||||||||||| | |||||
Sbjct: 414 gccattgagggtgttccagagttgaaggcttatctcggtgctaggttttctcttaagtct 473
Query: 670 ggaatgaagccacatgagctagtcttctag 699
|| |||||||||||||||||| ||||||||
Sbjct: 474 ggcatgaagccacatgagctactcttctag 503