Miyakogusa Predicted Gene
- Lj3g3v0850570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0850570.1 tr|G7IWL8|G7IWL8_MEDTR E3 ubiquitin-protein
ligase makorin OS=Medicago truncatula GN=MTR_3g028190 PE,83.02,0,no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_1,Zinc finger,
RING-type, conserved site; zi,CUFF.41582.1
(954 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62424 similar to UniRef100_A9T2C7 Cluster: Predicted ... 1403 0.0
gnl|LJGI|TC74125 weakly similar to UniRef100_A9T2C7 Cluster: Pre... 868 0.0
gnl|LJGI|TC59227 250 1e-65
gnl|LJGI|GO013678 similar to UniRef100_Q76KB3 Cluster: Makorin r... 90 3e-17
gnl|LJGI|TC64363 similar to UniRef100_Q7X7W8 Cluster: Makorin ri... 74 2e-12
gnl|LJGI|TC76518 similar to UniRef100_Q76KB3 Cluster: Makorin ri... 64 2e-09
>gnl|LJGI|TC62424 similar to UniRef100_A9T2C7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(46%)
Length = 869
Score = 1403 bits (708), Expect = 0.0
Identities = 708/708 (100%)
Strand = Plus / Plus
Query: 1 atgtctaagagggttctctgtaagttctttgctcatggagcatgtctgaaaggggagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atgtctaagagggttctctgtaagttctttgctcatggagcatgtctgaaaggggagcat 221
Query: 61 tgtgaattttcgcatgactggaaagatcctccaaacaatatatgcacatattatcagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tgtgaattttcgcatgactggaaagatcctccaaacaatatatgcacatattatcagaaa 281
Query: 121 ggagtctgtgcttatggtagtcgatgcagatatgatcatgtcaaagcttctcaagcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggagtctgtgcttatggtagtcgatgcagatatgatcatgtcaaagcttctcaagcacag 341
Query: 181 tcctctgctccaagttcttcagtagtcgaacaccagccccttgtttctggttcttttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tcctctgctccaagttcttcagtagtcgaacaccagccccttgtttctggttcttttgtg 401
Query: 241 tttggtaatccaagaatttcatcaaatggtgttgctgcagctgcggagtcttctctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tttggtaatccaagaatttcatcaaatggtgttgctgcagctgcggagtcttctctttct 461
Query: 301 aagagtccttacattcacaccagtaaaccagcctggaaccaagaatctaattatcatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aagagtccttacattcacaccagtaaaccagcctggaaccaagaatctaattatcatgat 521
Query: 361 ttattaggggaagatgatgttgatgttggccaacctataactactttaccttctgagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttattaggggaagatgatgttgatgttggccaacctataactactttaccttctgagctt 581
Query: 421 tcaatatgctcatttgctgctgttggcaactgtccaagaggggaaaagtgtcctcatatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tcaatatgctcatttgctgctgttggcaactgtccaagaggggaaaagtgtcctcatatt 641
Query: 481 catggggatctatgtcccacttgtgggaagcattgcttgcatcctttccgacctgaggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 catggggatctatgtcccacttgtgggaagcattgcttgcatcctttccgacctgaggaa 701
Query: 541 agagaagaacatatcaagagttgtgaagataagcaaaagcatcttgaggcattgaaacgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 agagaagaacatatcaagagttgtgaagataagcaaaagcatcttgaggcattgaaacgg 761
Query: 601 agtcaagaaattgaatgcagtgtatgcctggagcgtgttctttcaaagcctacagcagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 agtcaagaaattgaatgcagtgtatgcctggagcgtgttctttcaaagcctacagcagct 821
Query: 661 gaacgtaagtttgggctgctatctgaatgtgatcatccattctgcata 708
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gaacgtaagtttgggctgctatctgaatgtgatcatccattctgcata 869
>gnl|LJGI|TC74125 weakly similar to UniRef100_A9T2C7 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(16%)
Length = 730
Score = 868 bits (438), Expect = 0.0
Identities = 444/446 (99%)
Strand = Plus / Plus
Query: 1 atgtctaagagggttctctgtaagttctttgctcatggagcatgtctgaaaggggagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgtctaagagggttctctgtaagttctttgctcatggagcatgtctgaaaggggagcat 254
Query: 61 tgtgaattttcgcatgactggaaagatcctccaaacaatatatgcacatattatcagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tgtgaattttcgcatgactggaaagatcctccaaacaatatatgcacatattatcagaaa 314
Query: 121 ggagtctgtgcttatggtagtcgatgcagatatgatcatgtcaaagcttctcaagcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggagtctgtgcttatggtagtcgatgcagatatgatcatgtcaaagcttctcaagcacag 374
Query: 181 tcctctgctccaagttcttcagtagtcgaacaccagccccttgtttctggttcttttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcctctgctccaagttcttcagtagtcgaacaccagccccttgtttctggttcttttgtg 434
Query: 241 tttggtaatccaagaatttcatcaaatggtgttgctgcagctgcggagtcttctctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tttggtaatccaagaatttcatcaaatggtgttgctgcagctgcggagtcttctctttct 494
Query: 301 aagagtccttacattcacaccagtaaaccagcctggaaccaagaatctaattatcatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagagtccttacattcacaccagtaaaccagcctggaaccaagaatctaattatcatgat 554
Query: 361 ttattaggggaagatgatgttgatgttggccaacctataactactttaccttctgagctt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttattaggggaagatgatgttgatgttggccaacctataactactttaccttctgagctc 614
Query: 421 tcaatatgctcatttgctgctgttgg 446
||||||||||||||||||||| ||||
Sbjct: 615 tcaatatgctcatttgctgcttttgg 640
>gnl|LJGI|TC59227
Length = 866
Score = 250 bits (126), Expect = 1e-65
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 829 tactctacaagtgaagagaaacaggaaattgttgatacctacaaggcaaagctcaagtca 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tactctacaagtgaagagaaacaggaaattgttgatacctacaaggcaaagctcaagtca 60
Query: 889 attgactgcaagcattttgactttggggatgggaattgcccttttggaactagttgtttc 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgactgcaagcattttgactttggggatgggaattgcccttttggaactagttgtttc 120
Query: 949 tacaag 954
||||||
Sbjct: 121 tacaag 126
>gnl|LJGI|GO013678 similar to UniRef100_Q76KB3 Cluster: Makorin ring-zinc-finger
protein; n=1; Pisum sativum|Rep: Makorin
ring-zinc-finger protein - Pisum sativum (Garden pea),
partial (32%)
Length = 881
Score = 89.7 bits (45), Expect = 3e-17
Identities = 105/125 (84%)
Strand = Plus / Minus
Query: 790 cgcaagctatcttactttgttgttccaagtgttatttggtactctacaagtgaagagaaa 849
||||| ||||| || ||||| ||||||||| |||||||| |||||||| |||||||||
Sbjct: 544 cgcaaactatcctattttgtcattccaagtgctatttggttctctacaaaggaagagaaa 485
Query: 850 caggaaattgttgatacctacaaggcaaagctcaagtcaattgactgcaagcattttgac 909
||||||||| |||| | |||||||| |||| ||| || |||| |||||||||||| ||
Sbjct: 484 caggaaattattgacaactacaagggaaagtgcaaatcggttgattgcaagcattttaac 425
Query: 910 tttgg 914
|||||
Sbjct: 424 tttgg 420
>gnl|LJGI|TC64363 similar to UniRef100_Q7X7W8 Cluster: Makorin ring-zinc-finger
protein; n=2; Pisum sativum|Rep: Makorin
ring-zinc-finger protein - Pisum sativum (Garden pea),
partial (27%)
Length = 981
Score = 73.8 bits (37), Expect = 2e-12
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 790 cgcaagctatcttactttgttgttccaagtgttatttggtactctacaagtgaagagaaa 849
||||| ||||| || ||||| ||||||||| |||||||| |||||||| |||||||||
Sbjct: 895 cgcaaactatcctattttgtcattccaagtgctatttggttctctacaaaggaagagaaa 954
Query: 850 caggaaattgttgatacctacaagg 874
||||||||| |||| | ||||||||
Sbjct: 955 caggaaattattgacaactacaagg 979
>gnl|LJGI|TC76518 similar to UniRef100_Q76KB3 Cluster: Makorin ring-zinc-finger
protein; n=1; Pisum sativum|Rep: Makorin
ring-zinc-finger protein - Pisum sativum (Garden pea),
partial (32%)
Length = 899
Score = 63.9 bits (32), Expect = 2e-09
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 847 aaacaggaaattgttgatacctacaaggcaaagctcaagtcaattgactgcaagcatttt 906
|||||||||||| |||| | |||||||| |||| ||| || |||| ||||||||||||
Sbjct: 1 aaacaggaaattattgacaactacaagggaaagtgcaaatcggttgattgcaagcatttt 60
Query: 907 gactttggggatgggaattgcccttttggaactagttgtttctacaag 954
||||||| ||||||| || || ||||| |||| ||||||||||||
Sbjct: 61 aactttggaaatgggaactgtccatttggggctagatgtttctacaag 108