Miyakogusa Predicted Gene

Lj3g3v0839410.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0839410.2 Non Chatacterized Hit- tr|I1MJN9|I1MJN9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26174
PE,62.07,0,SUBFAMILY NOT NAMED,NULL; TELOMERASE REVERSE
TRANSCRIPTASE,NULL; Telomerase_RBD,Telomerase ribonucle,CUFF.41578.2
         (3756 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73344 weakly similar to UniRef100_Q1AK04 Cluster: Tel...   632   e-180

>gnl|LJGI|TC73344 weakly similar to UniRef100_Q1AK04 Cluster: Telomerase reverse
            transcriptase; n=3; Phragmipedium longifolium|Rep:
            Telomerase reverse transcriptase - Phragmipedium
            longifolium, partial (8%)
          Length = 472

 Score =  632 bits (319), Expect = e-180
 Identities = 322/323 (99%)
 Strand = Plus / Plus

                                                                        
Query: 3434 gcaaatttgacaaaagattttgttcagaaattattcagagttctctgagatacatgtacc 3493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10   gcaaatttgacaaaagattttgttcagaaattattcagagttctctgagatacatgtacc 69

                                                                        
Query: 3494 ggctgattaagaaaaggatacgatctgtgcatcgtcaatccggtatccggccaattctca 3553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70   ggctgattaagaaaaggatacgatctgtgcatcgtcaatccggtatccggccaattctca 129

                                                                        
Query: 3554 agttggagaaggaagaagtggaatggctcgggttacatgctttcgtacaagtactgaggc 3613
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130  agttggagaaggaagaagtggaatggctcgggttacatgctttcgtacaagtactgaggc 189

                                                                        
Query: 3614 ggaagcaatcgcgtcatcggcagttgctggcagttctgaggtcaatgttgtcattacata 3673
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 190  ggaagcaatcgcgtcatcggcagttgctggcagttctgaggtcaatgttgtcatcacata 249

                                                                        
Query: 3674 ggatgtccgagggagtgtcacctgaactgcagtatgcaacaaatgctgaaaattcttctt 3733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250  ggatgtccgagggagtgtcacctgaactgcagtatgcaacaaatgctgaaaattcttctt 309

                                   
Query: 3734 tggtatgggacataaaatattag 3756
            |||||||||||||||||||||||
Sbjct: 310  tggtatgggacataaaatattag 332