Miyakogusa Predicted Gene
- Lj3g3v0838350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0838350.1 Non Chatacterized Hit- tr|I1L2G6|I1L2G6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,94.22,0,CELLULOSE
SYNTHASE-RELATED,NULL; X-BOX TRANSCRIPTION FACTOR-RELATED,NULL;
seg,NULL; Cellulose_synt,C,
NODE_46472_length_1316_cov_218.036469.path2.1
(885 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66056 homologue to UniRef100_A7Q2A3 Cluster: Chromoso... 1489 0.0
gnl|LJGI|TC59037 homologue to UniRef100_Q8H2C6 Cluster: Cellulos... 934 0.0
gnl|LJGI|TC77039 homologue to UniRef100_A7Q2A3 Cluster: Chromoso... 345 3e-94
gnl|LJGI|BP049984 homologue to UniRef100_A7PWE3 Cluster: Chromos... 157 1e-37
gnl|LJGI|TC78160 homologue to UniRef100_Q9SWW6 Cluster: Cellulos... 100 3e-20
gnl|LJGI|TC73929 homologue to UniRef100_Q6YBV2 Cluster: Cellulos... 100 3e-20
gnl|LJGI|TC81605 similar to UniRef100_Q2IB41 Cluster: Cellulose ... 92 7e-18
gnl|LJGI|TC58598 homologue to UniRef100_P93155 Cluster: Cellulos... 80 3e-14
gnl|LJGI|TC79938 similar to UniRef100_A7Q795 Cluster: Chromosome... 78 1e-13
gnl|LJGI|CN825218 homologue to UniRef100_Q6DUJ3 Cluster: CesA1; ... 56 4e-07
>gnl|LJGI|TC66056 homologue to UniRef100_A7Q2A3 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 1092
Score = 1489 bits (751), Expect = 0.0
Identities = 760/763 (99%)
Strand = Plus / Plus
Query: 123 ggaaattcttctaagtcgacattgtcctatctggtatggctatagtggaaggctaaagtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaattcttctaagtcgacattgtcctatctggtatggctatagtggaaggctaaagtg 60
Query: 183 gctcgaacggttcgcctatgtgaacaccaccatctatccaatcacttccattccccttct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctcgaacggttcgcctatgtgaacaccaccatctatccaatcacttccattccccttct 120
Query: 243 catgtattgtaccttacctgctatctgtctcctgaccaacaagttcattattccacagat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgtattgtaccttacctgctatctgtctcctgaccaacaagttcattattccacagat 180
Query: 303 tagtaaccttgcaagtatatggtttatctctctctttctttccatctttgcaaccggtat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagtaaccttgcaagtatatggtttatctctctctttctttccatctttgcaaccggtat 240
Query: 363 ccttgagatgaggtggagtggtgttggaattgacgagtggtggagaaatgaacaattttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccttgagatgaggtggagtggtgttggaattgacgagtggtggagaaatgaacaattttg 300
Query: 423 ggttattggtggtgtttcagcccatctctttgccgtgttccaaggtttactcaaagtgct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggttattggtggtgtttcagcccatctctttgccgtgttccaaggtttactcaaagtgct 360
Query: 483 ggccggaattgacactaacttcactgttacctcaaagtcatcagatgaagatggagactt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggccggaattgacactaacttcactgttacctcaaagtcatcagatgaagatggagactt 420
Query: 543 cgaagaactctacatgtttaaatggacaacacttctcattccacccacaactcttctcat 602
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 cgaagaactctacatgtttaaatggacaacacttctcattccacccacaacacttctcat 480
Query: 603 cattaacatggtgggggttgttgcaggaatctcctatgccgttaacagcgggtaccaatc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cattaacatggtgggggttgttgcaggaatctcctatgccgttaacagcgggtaccaatc 540
Query: 663 atggggtcccctctttggtaagcttttctttgcattttgggtgattgtccatctctaccc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atggggtcccctctttggtaagcttttctttgcattttgggtgattgtccatctctaccc 600
Query: 723 cttcctcagaggtctcatgggacgccagaacagaacaccaaccattgtggtggtctggtc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttcctcagaggtctcatgggacgccagaacagaacaccaaccattgtggtggtctggtc 660
Query: 783 cattctgctttcatccatcttttcacttttgtgggtccgaatcgacccgtttgcaaccaa 842
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 661 cattctgcttgcatccatcttttcacttttgtgggtccgaatcgacccgtttacaaccaa 720
Query: 843 agtcactggccctaaggttgaggagtgtggaatcaactgctag 885
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agtcactggccctaaggttgaggagtgtggaatcaactgctag 763
>gnl|LJGI|TC59037 homologue to UniRef100_Q8H2C6 Cluster: Cellulose synthase; n=1;
Populus tremuloides|Rep: Cellulose synthase - Populus
tremuloides (Quaking aspen), partial (26%)
Length = 1037
Score = 934 bits (471), Expect = 0.0
Identities = 762/859 (88%)
Strand = Plus / Plus
Query: 27 atactgcatgcccaagcttgcagcattcaaaggttctgctcctatcaatctttcagatcg 86
|||||||||||| |||| ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 2 atactgcatgcctaagcgcccagcatttaaaggttctgctcctatcaatctttcggatcg 61
Query: 87 tttgaaccaagtgctacgttgggctttaggatcagtggaaattcttctaagtcgacattg 146
| | |||||||| || || |||||||||||||| || |||||||| ||||| |||||||
Sbjct: 62 tctaaaccaagtacttcgatgggctttaggatctgttgaaattctactaagcagacattg 121
Query: 147 tcctatctggtatggctatagtggaaggctaaagtggctcgaacggttcgcctatgtgaa 206
||| |||||||| || ||| ||||||| |||||||||||||||||||| || ||||||||
Sbjct: 122 tcccatctggtacggttatggtggaagactaaagtggctcgaacggtttgcatatgtgaa 181
Query: 207 caccaccatctatccaatcacttccattccccttctcatgtattgtaccttacctgctat 266
|||||| ||||||||||||||| |||||||||||||||||||||||||||| || ||| |
Sbjct: 182 caccacaatctatccaatcactgccattccccttctcatgtattgtaccttgcccgctgt 241
Query: 267 ctgtctcctgaccaacaagttcattattccacagattagtaaccttgcaagtatatggtt 326
||| || ||||||||||||||||| ||||| ||||| || ||| ||||||||||||||||
Sbjct: 242 ctgccttctgaccaacaagttcatcattccccagatcagcaacattgcaagtatatggtt 301
Query: 327 tatctctctctttctttccatctttgcaaccggtatccttgagatgaggtggagtggtgt 386
||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 302 tatctctctctttctttccatttttgcaactgggatccttgagatgaggtggagtggtgt 361
Query: 387 tggaattgacgagtggtggagaaatgaacaattttgggttattggtggtgtttcagccca 446
||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 362 tggaattgatgagtggtggaggaatgaacaattctgggttattggtggtgtgtcagcaca 421
Query: 447 tctctttgccgtgttccaaggtttactcaaagtgctggccggaattgacactaacttcac 506
||||||||| |||||||||||| ||||||||||||| || ||||||||||| ||||||||
Sbjct: 422 tctctttgctgtgttccaaggtctactcaaagtgctcgctggaattgacaccaacttcac 481
Query: 507 tgttacctcaaagtcatcagatgaagatggagacttcgaagaactctacatgtttaaatg 566
||| ||||| ||| |||||||||||||||| |||| | ||| |||||| ||||||||||
Sbjct: 482 tgtcacctccaaggcatcagatgaagatggcgactctgcagagctctacttgtttaaatg 541
Query: 567 gacaacacttctcattccacccacaactcttctcatcattaacatggtgggggttgttgc 626
|||||| |||||||| || |||||||| |||||||| || ||| |||| |||||||||||
Sbjct: 542 gacaacccttctcataccccccacaacccttctcataataaacttggttggggttgttgc 601
Query: 627 aggaatctcctatgccgttaacagcgggtaccaatcatggggtcccctctttggtaagct 686
||||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 602 tggaatttcctatgccattaacagtggttaccagtcatggggtcccctctttggtaagct 661
Query: 687 tttctttgcattttgggtgattgtccatctctaccccttcctcagaggtctcatgggacg 746
|||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||
Sbjct: 662 tttctttgcattttgggtcatcatccatctctaccccttcctcaaaggtctcatgggacg 721
Query: 747 ccagaacagaacaccaaccattgtggtggtctggtccattctgctttcatccatcttttc 806
|||||| ||||||| |||||||||||||||||||||||||| ||| ||||||| || ||
Sbjct: 722 gcagaaccgaacaccgaccattgtggtggtctggtccattcttcttgcatccattttctc 781
Query: 807 acttttgtgggtccgaatcgacccgtttgcaaccaaagtcactggccctaaggttgagga 866
|| || ||||| ||| | || ||||| | || | |||||| || ||||||||||||||
Sbjct: 782 tctgttatgggtacgagttgatccgttcaccacaagagtcaccggtcctaaggttgagga 841
Query: 867 gtgtggaatcaactgctag 885
||||||||| |||||||||
Sbjct: 842 gtgtggaattaactgctag 860
>gnl|LJGI|TC77039 homologue to UniRef100_A7Q2A3 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 591
Score = 345 bits (174), Expect = 3e-94
Identities = 317/365 (86%)
Strand = Plus / Plus
Query: 521 catcagatgaagatggagacttcgaagaactctacatgtttaaatggacaacacttctca 580
||||||||||||||| |||| | ||| |||||| |||||||||||||||| |||||||
Sbjct: 2 catcagatgaagatgncgactctgcagagctctacttgtttaaatggacaacccttctca 61
Query: 581 ttccacccacaactcttctcatcattaacatggtgggggttgttgcaggaatctcctatg 640
| || |||||||| |||||||| || ||| |||| ||| ||||||| ||||| |||||||
Sbjct: 62 taccccccacaacccttctcataataaacttggttgggtttgttgctggaatttcctatg 121
Query: 641 ccgttaacagcgggtaccaatcatggggtcccctctttggtaagcttttctttgcatttt 700
|| ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccattaacagtggttaccagtcatggggtcccctctttggtaagcttttctttgcatttt 181
Query: 701 gggtgattgtccatctctaccccttcctcagaggtctcatgggacgccagaacagaacac 760
|||| || ||||||||||||||||||||| ||||||||||||||| |||||| ||||||
Sbjct: 182 gggtcatcatccatctctaccccttcctcaaaggtctcatgggacggcagaaccgaacac 241
Query: 761 caaccattgtggtggtctggtccattctgctttcatccatcttttcacttttgtgggtcc 820
| |||||||||||||||||||||||||| ||| ||||||| || || || || ||||| |
Sbjct: 242 cgaccattgtggtggtctggtccattcttcttgcatccattttctctctgttatgggtac 301
Query: 821 gaatcgacccgtttgcaaccaaagtcactggccctaaggttgaggagtgtggaatcaact 880
|| | || ||||| | || | |||||| || ||||||||||||||||||||||| ||||
Sbjct: 302 gagttgatccgttcaccacaagagtcaccggtcctaaggttgaggagtgtggaattaact 361
Query: 881 gctag 885
|||||
Sbjct: 362 gctag 366
>gnl|LJGI|BP049984 homologue to UniRef100_A7PWE3 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 458
Score = 157 bits (79), Expect = 1e-37
Identities = 148/171 (86%)
Strand = Plus / Minus
Query: 715 ctctaccccttcctcagaggtctcatgggacgccagaacagaacaccaaccattgtggtg 774
|||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 353 ctctaccccttcctcaaaggtctcatgggacggcagaaccgaacaccgaccattgtggtg 294
Query: 775 gtctggtccattctgctttcatccatcttttcacttttgtgggtccgaatcgacccgttt 834
|||||||||||||| ||| ||||||| || || || || ||||| ||| | || |||||
Sbjct: 293 gtctggtccattcttcttgcatccattttctctctgttatgggtacgagttgatccgttc 234
Query: 835 gcaaccaaagtcactggccctaaggttgaggagtgtggaatcaactgctag 885
| || | |||||| || ||||||||||||||||||||||| |||||||||
Sbjct: 233 accacaagagtcaccggtcctaaggttgaggagtgtggaattaactgctag 183
>gnl|LJGI|TC78160 homologue to UniRef100_Q9SWW6 Cluster: Cellulose synthase A
catalytic subunit 7 [UDP-forming]; n=1; Arabidopsis
thaliana|Rep: Cellulose synthase A catalytic subunit 7
[UDP-forming] - Arabidopsis thaliana (Mouse-ear cress),
partial (20%)
Length = 944
Score = 99.6 bits (50), Expect = 3e-20
Identities = 298/380 (78%), Gaps = 3/380 (0%)
Strand = Plus / Plus
Query: 391 attgacgagtggtggagaaatgaacaattttgggttattggtggtgtttcagcccatctc 450
||||| || |||||||||||||| || || ||||| ||||||||||| ||||| ||||||
Sbjct: 139 attgaggaatggtggagaaatgagcagttctgggtcattggtggtgtatcagcacatctc 198
Query: 451 tttgccgtgttccaaggtttactcaaagtgctggccggaattgacactaacttcactgtt 510
||||| || | |||||| | || || || ||||| ||||||||||| ||||||||||||
Sbjct: 199 tttgctgttatacaaggtcttctgaaggttctggctggaattgacaccaacttcactgtt 258
Query: 511 acctcaaagtcatcagatgaagatggagacttcgaagaactctacatgtttaaatggaca 570
|| || ||| || ||||| |||| |||||||| ||| | || |||| |||||
Sbjct: 259 acatccaaggcaacagat---gatgaagacttcggcgaattatatgcaattaagtggact 315
Query: 571 acacttctcattccacccacaactcttctcatcattaacatggtgggggttgttgcagga 630
|| || || ||||| || || ||| | | ||||| || || || || |||||||| |||
Sbjct: 316 accctcctaattcctccaaccactatcttaatcatcaatattgttggtgttgttgctgga 375
Query: 631 atctcctatgccgttaacagcgggtaccaatcatggggtcccctctttggtaagcttttc 690
|||| ||||| | |||| || |||||||| ||||| || || ||||| ||||| |||
Sbjct: 376 gtctcagatgccataaacaatggctaccaatcctggggaccactatttgggaagctcttc 435
Query: 691 tttgcattttgggtgattgtccatctctaccccttcctcagaggtctcatgggacgccag 750
||| | || |||||||||||||||||||| || ||||||| |||| | ||||| || |||
Sbjct: 436 ttttccttctgggtgattgtccatctctatccattcctcaaaggtttgatgggtcggcag 495
Query: 751 aacagaacaccaaccattgt 770
||| | || || ||||||||
Sbjct: 496 aaccgcacgccgaccattgt 515
>gnl|LJGI|TC73929 homologue to UniRef100_Q6YBV2 Cluster: Cellulose synthase; n=1;
Populus tremuloides|Rep: Cellulose synthase - Populus
tremuloides (Quaking aspen), partial (29%)
Length = 951
Score = 99.6 bits (50), Expect = 3e-20
Identities = 176/218 (80%)
Strand = Plus / Plus
Query: 364 cttgagatgaggtggagtggtgttggaattgacgagtggtggagaaatgaacaattttgg 423
|||||| | ||||||||||| || || || || || ||||||||||||||||| || |||
Sbjct: 420 cttgagctcaggtggagtggggtcggtatagaagattggtggagaaatgaacagttctgg 479
Query: 424 gttattggtggtgtttcagcccatctctttgccgtgttccaaggtttactcaaagtgctg 483
|||||||| || ||||| ||||||||||| ||||||||||| | || ||||||||
Sbjct: 480 gttattggaggaacatcagcacatctctttgcagtgttccaagggcttcttaaagtgctt 539
Query: 484 gccggaattgacactaacttcactgttacctcaaagtcatcagatgaagatggagacttc 543
|| || ||||| || || ||||||||||| || ||| || ||||||||||| |||||
Sbjct: 540 gctgggattgatacaaatttcactgttacatctaaggcaaatgatgaagatggcgacttt 599
Query: 544 gaagaactctacatgtttaaatggacaacacttctcat 581
|||| || || || || ||||||||| ||||||||||
Sbjct: 600 caagagctatatatattcaaatggacatcacttctcat 637
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 47 cagcattcaaaggttctgctcctatcaatctttcagatcgtttgaaccaagtgctacgtt 106
|||||||||| ||||||||||| ||||||||||| || ||| | || || ||||| ||||
Sbjct: 103 cagcattcaagggttctgctcccatcaatctttctgaccgtctcaatcaggtgcttcgtt 162
Query: 107 gggc 110
||||
Sbjct: 163 gggc 166
>gnl|LJGI|TC81605 similar to UniRef100_Q2IB41 Cluster: Cellulose synthase 3; n=1;
Eucalyptus grandis|Rep: Cellulose synthase 3 - Eucalyptus
grandis (Flooded gum), partial (39%)
Length = 1281
Score = 91.7 bits (46), Expect = 7e-18
Identities = 103/122 (84%)
Strand = Plus / Plus
Query: 391 attgacgagtggtggagaaatgaacaattttgggttattggtggtgtttcagcccatctc 450
||||| || |||||||||||||| || || ||||| ||||||||||| ||||| ||||||
Sbjct: 1029 attgaggaatggtggagaaatgagcagttctgggtcattggtggtgtatcagcacatctc 1088
Query: 451 tttgccgtgttccaaggtttactcaaagtgctggccggaattgacactaacttcactgtt 510
||||| || | |||||| | || || || ||||| ||||||||||| ||||||||||||
Sbjct: 1089 tttgctgttatacaaggtcttctgaaggttctggctggaattgacaccaacttcactgtt 1148
Query: 511 ac 512
||
Sbjct: 1149 ac 1150
>gnl|LJGI|TC58598 homologue to UniRef100_P93155 Cluster: Cellulose synthase; n=3;
Gossypium|Rep: Cellulose synthase - Gossypium hirsutum
(Upland cotton) (Gossypium mexicanum), partial (34%)
Length = 1252
Score = 79.8 bits (40), Expect = 3e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 686 ttttctttgcattttgggtgattgtccatctctaccccttcctcagaggtctcatgggac 745
|||||||||| || ||||||||| | |||||||| |||||||||| |||||||||||| |
Sbjct: 798 ttttctttgccttctgggtgatttttcatctctatcccttcctcaaaggtctcatgggtc 857
Query: 746 gccagaac 753
||||||||
Sbjct: 858 gccagaac 865
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 421 tgggttattggtggtgtttcagcccatctctttgccgtgttccaagg 467
||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 536 tgggtgattggaggtgtttcagctcatctcttcgccgtcttccaagg 582
>gnl|LJGI|TC79938 similar to UniRef100_A7Q795 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 1021
Score = 77.8 bits (39), Expect = 1e-13
Identities = 99/119 (83%)
Strand = Plus / Plus
Query: 355 accggtatccttgagatgaggtggagtggtgttggaattgacgagtggtggagaaatgaa 414
||||||||||| |||||| |||| |||||||||| || || || |||||||| |||||
Sbjct: 775 accggtatcctcgagatgcagtggggtggtgttggtatagatgattggtggaggaatgag 834
Query: 415 caattttgggttattggtggtgtttcagcccatctctttgccgtgttccaaggtttact 473
|| |||||||| ||||| |||||||| | |||||||||||| | ||||| ||| ||||
Sbjct: 835 cagttttgggtgattggaggtgtttcttcacatctctttgcccttttccagggtctact 893
Score = 63.9 bits (32), Expect = 2e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 47 cagcattcaaaggttctgctcctatcaatctttcagatcgtttgaaccaagt 98
||||||||||||| ||||| |||||||| |||||||||||| || |||||||
Sbjct: 467 cagcattcaaagggtctgcacctatcaacctttcagatcgtctgcaccaagt 518
>gnl|LJGI|CN825218 homologue to UniRef100_Q6DUJ3 Cluster: CesA1; n=1; Acacia
mangium|Rep: CesA1 - Acacia mangium, partial (15%)
Length = 518
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 47 cagcattcaaaggttctgctcctatcaatctttcagatcgtttgaaccaagtgctacgtt 106
|||||||||| ||||||||||| ||||||||||| || ||| | || || ||||| ||||
Sbjct: 430 cagcattcaagggttctgctcccatcaatctttctgaccgtctcaatcaggtgcttcgtt 489
Query: 107 gggc 110
||||
Sbjct: 490 gggc 493