Miyakogusa Predicted Gene
- Lj3g3v0838340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0838340.1 Non Chatacterized Hit- tr|I1PEL9|I1PEL9_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,51.35,4e-19,Ankyrin repeat,Ankyrin repeat-containing domain;
seg,NULL; ANK_REPEAT,Ankyrin repeat; ANK_REP_REGION,CUFF.41570.1
(469 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80782 similar to UniRef100_A7Q2A5 Cluster: Chromosome... 912 0.0
gnl|LJGI|TC58284 similar to UniRef100_A7Q2A5 Cluster: Chromosome... 210 6e-54
>gnl|LJGI|TC80782 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 680
Score = 912 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Plus
Query: 1 atgtacggtgattcagagatttcaaaatctgcttcaacttcatctgcggtagaaggttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atgtacggtgattcagagatttcaaaatctgcttcaacttcatctgcggtagaaggttca 280
Query: 61 acttacgtcaaagacatgaaaaatctaactgttcatactgaagattctttttccacctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 acttacgtcaaagacatgaaaaatctaactgttcatactgaagattctttttccacctta 340
Query: 121 catgaacttgcttctaacaatgattttgaaagtttcaagctagctttagacagggatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 catgaacttgcttctaacaatgattttgaaagtttcaagctagctttagacagggatgct 400
Query: 181 tctctaataaatgaagttggcccctggtatgtccgtcaaagtggatccaaacaaattgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tctctaataaatgaagttggcccctggtatgtccgtcaaagtggatccaaacaaattgtt 460
Query: 241 cttgagcatagaactcctttaatggttgcttcttgctatgggagtattgatgttttaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cttgagcatagaactcctttaatggttgcttcttgctatgggagtattgatgttttaaag 520
Query: 301 cttatactcacatgttcagaggctgatgtaaatttctcctgtgggaatgataaaagcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 cttatactcacatgttcagaggctgatgtaaatttctcctgtgggaatgataaaagcact 580
Query: 361 gcccttcactgtgccgcttcaggcggttctgttaatgcagttgatgttatgaagctgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gcccttcactgtgccgcttcaggcggttctgttaatgcagttgatgttatgaagctgctt 640
Query: 421 ttatctgctggtgctgatatcaattgtgtggatgctaatg 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttatctgctggtgctgatatcaattgtgtggatgctaatg 680
>gnl|LJGI|TC58284 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 844
Score = 210 bits (106), Expect = 6e-54
Identities = 321/390 (82%), Gaps = 2/390 (0%)
Strand = Plus / Plus
Query: 76 atgaaaaatctaactgttcatactgaagattctttttccaccttacatgaacttgcttct 135
||||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||
Sbjct: 265 atgaaaacgctaactgtgaatactgaagattctttttccagtttactggaacttgcttct 324
Query: 136 aacaatgattttgaaagtttcaagctagct-ttagacagggatgcttctctaataaatga 194
||||||||||||||| |||| ||| |||| ||| ||| ||||||||| || |||||
Sbjct: 325 aacaatgattttgaaggttttaagg-agctcttatacaaggatgcttcgtcgattaatga 383
Query: 195 agttggcccctggtatgtccgtcaaagtggatccaaacaaattgttcttgagcatagaac 254
|| || | |||||||||||| |||| ||| || |||||||||||||||||||| || ||
Sbjct: 384 ggtcgggctctggtatgtccggcaaaatgggtcgaaacaaattgttcttgagcacaggac 443
Query: 255 tcctttaatggttgcttcttgctatgggagtattgatgttttaaagcttatactcacatg 314
|||||| ||||||||| || |||||| || ||||||||| | ||| ||||||| | ||
Sbjct: 444 tcctttgatggttgctgctacctatggtagcattgatgttctgaaggttatactttcgtg 503
Query: 315 ttcagaggctgatgtaaatttctcctgtgggaatgataaaagcactgcccttcactgtgc 374
| |||| || ||||| ||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 504 tccagaagcagatgtgaattttgcctgtggggtgaataaaagcactgctcttcactgtgc 563
Query: 375 cgcttcaggcggttctgttaatgcagttgatgttatgaagctgcttttatctgctggtgc 434
|| || || || |||||||| |||||||||| ||||||| |||||||| || |||||
Sbjct: 564 tgcctccggtgggtctgttaaggcagttgatgcggtgaagcttcttttatcagccggtgc 623
Query: 435 tgatatcaattgtgtggatgctaatggaaa 464
|||| |||| || |||||||| ||||||||
Sbjct: 624 tgatgtcaactgcgtggatgcgaatggaaa 653