Miyakogusa Predicted Gene
- Lj3g3v0838310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0838310.1 Non Chatacterized Hit- tr|A9NXG9|A9NXG9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,33.83,5e-18,seg,NULL; PEI1, NUCLEIC ACID BINDING / TRANSCRIPTION
FACTOR,NULL; UNCHARACTERIZED,NULL,TC72943.path1.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72943 similar to UniRef100_A7Q2A5 Cluster: Chromosome... 1433 0.0
gnl|LJGI|TC81286 similar to UniRef100_A7Q2A5 Cluster: Chromosome... 238 4e-62
gnl|LJGI|BW630119 similar to UniRef100_A7Q2A5 Cluster: Chromosom... 66 3e-10
>gnl|LJGI|TC72943 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1189
Score = 1433 bits (723), Expect = 0.0
Identities = 723/723 (100%)
Strand = Plus / Plus
Query: 1 atgagccgatctggttggtctaagacactaactccatcaaatctcgatgatctattttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atgagccgatctggttggtctaagacactaactccatcaaatctcgatgatctattttca 90
Query: 61 gctgaaatttcttcgtctcctcggtattctgacccagcagcagcttctgtattttcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gctgaaatttcttcgtctcctcggtattctgacccagcagcagcttctgtattttcccca 150
Query: 121 acacatagatcagctgttctcaatcagtttcaacagcttcaaagttcgttatcacccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 acacatagatcagctgttctcaatcagtttcaacagcttcaaagttcgttatcacccata 210
Query: 181 aatacaaatgtcttatctcctaataacggtgagcatcctctaagagattcttcatttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aatacaaatgtcttatctcctaataacggtgagcatcctctaagagattcttcatttggt 270
Query: 241 gtctcttcgcctggaaggatgtcaccaagaagtgtggaacccctctctccagggagctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtctcttcgcctggaaggatgtcaccaagaagtgtggaacccctctctccagggagctct 330
Query: 301 cgattatcagcatttgctcagcgtgagaaacaacagcaacagctgcggagccttagttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cgattatcagcatttgctcagcgtgagaaacaacagcaacagctgcggagccttagttca 390
Query: 361 agggatctgggcgccaacaatcctgcctcaattgttgggtcccctattaactcctggtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agggatctgggcgccaacaatcctgcctcaattgttgggtcccctattaactcctggtct 450
Query: 421 aagtggggatctcctactggaaaagtagattggtctgtaaatggaaatgagctaggtcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagtggggatctcctactggaaaagtagattggtctgtaaatggaaatgagctaggtcga 510
Query: 481 ttacaaagatcatcctcatttgagcttggaaacaatggagaagagcctgatctatcatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttacaaagatcatcctcatttgagcttggaaacaatggagaagagcctgatctatcatgg 570
Query: 541 gtccaatcccttgtcaaggacaccccacctgaaataaaagagaagttggcagtgtctggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gtccaatcccttgtcaaggacaccccacctgaaataaaagagaagttggcagtgtctggc 630
Query: 601 cctattgcatctgctgatggactgaattccaattttcaaatggagactgttgataattct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 cctattgcatctgctgatggactgaattccaattttcaaatggagactgttgataattct 690
Query: 661 gttttagaagcctggctcgagcaaatgcacctggatcagcatgtagtttatagtcaaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gttttagaagcctggctcgagcaaatgcacctggatcagcatgtagtttatagtcaaaat 750
Query: 721 tga 723
|||
Sbjct: 751 tga 753
>gnl|LJGI|TC81286 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1156
Score = 238 bits (120), Expect = 4e-62
Identities = 471/587 (80%), Gaps = 12/587 (2%)
Strand = Plus / Plus
Query: 133 gctgttctcaatcagtttcaacagcttcaaagttcgttatcacccataaatacaaatgtc 192
|||||| | |||||||||||||||||||||||| || | || || |||||||| || |
Sbjct: 1 gctgttatgaatcagtttcaacagcttcaaagtacgctgtcgcctataaataccaacatg 60
Query: 193 ttatctcctaataacggtgagcatcctctaagagattcttcatttggtgtctcttcgcct 252
| |||||||| || | |||||||||||| | | | |||||||| || |||| |||
Sbjct: 61 atgtctcctaagaatgttgagcatcctctgttacaggcctcatttggcgttgcttctcct 120
Query: 253 ggaaggatgtcaccaagaagtgtggaacccctctctccagggagctctcgattatcagca 312
|| || |||||||| |||||||| ||||| |||| ||| | || ||||| | || |||
Sbjct: 121 gggagaatgtcacctagaagtgttgaaccgatctccccaatgggcgctcgactgtcggca 180
Query: 313 tttgctcagcgtgagaaacaacagc---aacagctgcggagccttagttcaagggatctg 369
||| ||||||||||||||||||||| ||||||||||||| |||||||||| || ||
Sbjct: 181 tttcctcagcgtgagaaacaacagcagcaacagctgcggagtattagttcaagagagctt 240
Query: 370 ggcgccaacaatcctgcctcaattgttgggtcccctattaactcctggtctaagtgggga 429
|| |||||||| ||||||||| ||||||| |||||| | | | |||||||||||||||
Sbjct: 241 ggtgccaacaaccctgcctcagttgttggctcccctgcaagcccttggtctaagtgggga 300
Query: 430 tctcctactggaaaagtagattggtctgtaaatggaaatgagctagg---tcgattacaa 486
||||| | ||| | || |||||||||||||||||| |||| || || || | | |||
Sbjct: 301 tctccaaatgggatggttgattggtctgtaaatggagatgacctcggtcatcaaatgcaa 360
Query: 487 agatcatcctcatttgagcttggaaacaatggagaagagcctgatctatcatgggtccaa 546
||||||||||||||||| || ||| ||||| |||||||||||| ||||||||||||||
Sbjct: 361 agatcatcctcatttgaactgaaaaataatggggaagagcctgatgtatcatgggtccaa 420
Query: 547 tcccttgtcaaggacaccccacctga------aataaaagagaagttggcagtgtctggc 600
||||| || ||||| |||||||||| || ||||||||||| ||| ||||||
Sbjct: 421 tccctggtgaaggaatccccacctgagatgatgatgaaagagaagtttgcatcctctggc 480
Query: 601 cctattgcatctgctgatggactgaattccaattttcaaatggagactgttgataattct 660
||| ||||||||||||| |||||| || |||||| ||||| || | |||||| |||||
Sbjct: 481 cctgttgcatctgctgaaggactggatcccaattcccaaattgaatccgttgatcattct 540
Query: 661 gttttagaagcctggctcgagcaaatgcacctggatcagcatgtagt 707
|| |||| ||| ||||| ||||||||||| |||||||| | ||||||
Sbjct: 541 gtgttaggagcttggcttgagcaaatgcagctggatcaccttgtagt 587
>gnl|LJGI|BW630119 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 473
Score = 65.9 bits (33), Expect = 3e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 atgagccgatctggttggtctaagacactaact 33
|||||||||||||||||||||||||||||||||
Sbjct: 441 atgagccgatctggttggtctaagacactaact 473