Miyakogusa Predicted Gene

Lj3g3v0828230.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0828230.1 tr|G7ZWA7|G7ZWA7_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_038s0021 PE=4 SV=1,78.05,0.000000001,seg,NULL;
DUF295,Protein of unknown function DUF295,gene.g46242.t1.1
         (393 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV778399                                                     206   7e-53
gnl|LJGI|BW602963 similar to UniRef100_A7P8P1 Cluster: Chromosom...    68   4e-11
gnl|LJGI|AV422434 similar to UniRef100_A7P8P1 Cluster: Chromosom...    68   4e-11
gnl|LJGI|TC72516                                                       60   1e-08
gnl|LJGI|TC67753 similar to UniRef100_A7P8P1 Cluster: Chromosome...    58   4e-08

>gnl|LJGI|AV778399 
          Length = 500

 Score =  206 bits (104), Expect = 7e-53
 Identities = 107/108 (99%)
 Strand = Plus / Minus

                                                                       
Query: 28  acatcagctacactgatatatctttgtgtagcttttcttcttgcttcaagtgtggttgga 87
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acatcagctacactgatatatctttgtgtagcttttcttcttgcttcaagtgtggttgga 441

                                                           
Query: 88  tttctttcttggttttacccttacaatggaatgtcagttccgctaaag 135
           |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 440 tttctttcttggttttacccttaccatggaatgtcagttccgctaaag 393


>gnl|LJGI|BW602963 similar to UniRef100_A7P8P1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 454

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 137 ccgctctacctcctccgcttccgatccgtctgttccac 174
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 159 ccgctctacctcctccgcttccgctccgtctgttccac 196


>gnl|LJGI|AV422434 similar to UniRef100_A7P8P1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 422

 Score = 67.9 bits (34), Expect = 4e-11
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 137 ccgctctacctcctccgcttccgatccgtctgttccac 174
           ||||||||||||||||||||||| ||||||||||||||
Sbjct: 114 ccgctctacctcctccgcttccgctccgtctgttccac 151


>gnl|LJGI|TC72516 
          Length = 660

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 144 acctcctccgcttccgatccgtctgttcca 173
           ||||||||||||||||||||||||||||||
Sbjct: 288 acctcctccgcttccgatccgtctgttcca 317


>gnl|LJGI|TC67753 similar to UniRef100_A7P8P1 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 697

 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 140 ctctacctcctccgcttccgatccgtctgttccacct 176
           ||||||||||||||||| ||||||||||| |||||||
Sbjct: 189 ctctacctcctccgctttcgatccgtctgctccacct 225