Miyakogusa Predicted Gene
- Lj3g3v0828220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0828220.1 tr|G7IWS3|G7IWS3_MEDTR Actin related protein
OS=Medicago truncatula GN=MTR_3g030550 PE=3
SV=1,89.26,0,Actin,Actin-like; Actin-like ATPase domain,NULL;
ACTIN,Actin-like; no description,NULL; ACTIN-RELATE,CUFF.41567.1
(1089 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58394 similar to UniRef100_A7Q282 Cluster: Chromosome... 1368 0.0
gnl|LJGI|TC67999 similar to UniRef100_A7Q282 Cluster: Chromosome... 989 0.0
gnl|LJGI|GO012863 similar to UniRef100_A7Q282 Cluster: Chromosom... 367 e-100
gnl|LJGI|BP054187 similar to UniRef100_A7Q282 Cluster: Chromosom... 329 2e-89
gnl|LJGI|BP085427 homologue to UniRef100_Q0WW62 Cluster: Actin-l... 70 3e-11
>gnl|LJGI|TC58394 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 900
Score = 1368 bits (690), Expect = 0.0
Identities = 693/694 (99%)
Strand = Plus / Plus
Query: 1 atggaggccgcagtcatcgacgccggttccagcctcctcaaagccggtttcgcaattccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atggaggccgcagtcatcgacgccggttccagcctcctcaaagccggtttcgcaattccc 266
Query: 61 gatcaaactcccgcaatgctaattcctacccagatgaaacgaatggttgatgatggttca 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gatcaaactcccgcaatgataattcctacccagatgaaacgaatggttgatgatggttca 326
Query: 121 gtgagtgataattcgttggcggatgagattgccgttgatccgatcgtgcgagggtacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtgagtgataattcgttggcggatgagattgccgttgatccgatcgtgcgagggtacatt 386
Query: 181 cgagattgggatgctgttgaggatttgttgcaatatgttttgtacactggccttgggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cgagattgggatgctgttgaggatttgttgcaatatgttttgtacactggccttgggtgg 446
Query: 241 gaattgggcaatgaaggacagatactatttactgatccactttgtaccccaaaggctaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaattgggcaatgaaggacagatactatttactgatccactttgtaccccaaaggctaat 506
Query: 301 aaagaacagttagtgcaactattgtttgaaacattcaacgtatcagggttttatgcctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaagaacagttagtgcaactattgtttgaaacattcaacgtatcagggttttatgcctca 566
Query: 361 gaacaagcagtgttgtcactatatgctgtgggacgtatctcaggctgcacagttgatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaacaagcagtgttgtcactatatgctgtgggacgtatctcaggctgcacagttgatatt 626
Query: 421 ggttatggaaaaatagatattgctccggtaattgagggtgctgtcaaccacattgcctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ggttatggaaaaatagatattgctccggtaattgagggtgctgtcaaccacattgcctcg 686
Query: 481 agaagatttgagtttggaggtactgatctcactaattttctggcacaagaacttggcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agaagatttgagtttggaggtactgatctcactaattttctggcacaagaacttggcaaa 746
Query: 541 tccaatccgctagtgaatatcagcatgtctgatgttgagaaaataaaacagcaatactca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tccaatccgctagtgaatatcagcatgtctgatgttgagaaaataaaacagcaatactca 806
Query: 601 tgttgcgctgaagatgatttagcttatcagaagacccaagattcttgccctgcggagaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tgttgcgctgaagatgatttagcttatcagaagacccaagattcttgccctgcggagaca 866
Query: 661 catacccttcctgatggacaggtgatcacaattg 694
||||||||||||||||||||||||||||||||||
Sbjct: 867 catacccttcctgatggacaggtgatcacaattg 900
>gnl|LJGI|TC67999 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 1457
Score = 989 bits (499), Expect = 0.0
Identities = 802/903 (88%)
Strand = Plus / Plus
Query: 184 gattgggatgctgttgaggatttgttgcaatatgttttgtacactggccttgggtgggaa 243
|||||||| || ||||||||||| |||| |||||||||||||||||||||| ||||||
Sbjct: 234 gattgggacgccattgaggatttgctgcaccatgttttgtacactggccttggatgggaa 293
Query: 244 ttgggcaatgaaggacagatactatttactgatccactttgtaccccaaaggctaataaa 303
| |||||||||||||| ||||| |||||||||||||| |||||||||||||| || ||
Sbjct: 294 attggcaatgaaggacaaatactgtttactgatccactctgtaccccaaaggccaacaag 353
Query: 304 gaacagttagtgcaactattgtttgaaacattcaacgtatcagggttttatgcctcagaa 363
|||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 354 gaacagttagtgcaactaatgtttgaaacattcaacatatctgggttttatgcctcagaa 413
Query: 364 caagcagtgttgtcactatatgctgtgggacgtatctcaggctgcacagttgatattggt 423
||||| ||||||||||| ||||| ||||||||||| ||||| ||||| |||||||||||
Sbjct: 414 caagctgtgttgtcactgtatgcggtgggacgtatttcaggatgcactgttgatattggc 473
Query: 424 tatggaaaaatagatattgctccggtaattgagggtgctgtcaaccacattgcctcgaga 483
| ||||||||||||||||| || ||||||||||||||||| ||||||||||||| |||
Sbjct: 474 cacggaaaaatagatattgcaccagtaattgagggtgctgttcaccacattgcctcaaga 533
Query: 484 agatttgagtttggaggtactgatctcactaattttctggcacaagaacttggcaaatcc 543
||||| ||||| ||||||| ||||| |||||||| ||||| |||||||||||||| |||
Sbjct: 534 agattcgagttgggaggtatggatctaactaatttcctggctcaagaacttggcaagtcc 593
Query: 544 aatccgctagtgaatatcagcatgtctgatgttgagaaaataaaacagcaatactcatgt 603
||||| ||||| ||||||||| |||||||||| |||||||||||| |||||||||||||
Sbjct: 594 aatcctctagtaaatatcagcctgtctgatgtggagaaaataaaagagcaatactcatgc 653
Query: 604 tgcgctgaagatgatttagcttatcagaagacccaagattcttgccctgcggagacacat 663
|| ||||||||||| |||||||||||||||||| || ||| ||| |||| ||||| ||||
Sbjct: 654 tgtgctgaagatgaattagcttatcagaagaccgaacatttttgtcctgtggagaaacat 713
Query: 664 acccttcctgatggacaggtgatcacaattggaagagaaagatatactgtcggtgaagct 723
||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 714 acccttcctgatggacaggtgataacaattgggagagaaagatatactgttggtgaagct 773
Query: 724 ttattccgtccatctctattgggtatagaggctcatggcattgttgagcagcttgtccgt 783
||||||| ||| ||| |||||| |||| |||||||||||||||||||||||||||||
Sbjct: 774 ttattccagccaagtctgttgggtttagatgctcatggcattgttgagcagcttgtccga 833
Query: 784 actatttctagtgtgtcatctgataatcatcggcaacttctggagaataccgtggtttgt 843
|||||||| | ||| |||||||||||||||||||| ||||| || ||||| |||||||||
Sbjct: 834 actatttcaactgtatcatctgataatcatcggcagcttctagaaaatacggtggtttgt 893
Query: 844 ggtggcacttcttcaatgactggttttgaagagaggtttcagaaggaatctttcctaagt 903
|||||||||||||| ||||| ||||||||||| || ||||||||||||||| | |||||
Sbjct: 894 ggtggcacttcttctatgacaggttttgaagacagatttcagaaggaatctaacttaagt 953
Query: 904 tcatctgctgttcgacctaccctagtcaagcctccagaatacatgccagaaaatttaact 963
||||| || |||| ||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 954 tcatccgcggttcaacctacccttgttaagcctccagagtacatgccagaaaatttaacc 1013
Query: 964 aagtattctgcttgggtgggaggtgccatacttgccaaagtagtttttcctcaaaaccag 1023
| |||||| || ||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 1014 atgtattcagcatgggtgggaggtgccatacttgcaaaagtagttttccctcaaaatcag 1073
Query: 1024 catgtaactaaaggggactatgatgaaaatggaccttccattgtgcataagaaatgcttc 1083
||| ||||||| | ||||||||||||| |||||||||||||| ||| ||||||||||
Sbjct: 1074 catataactaaggcagactatgatgaaaccggaccttccattgttcatcggaaatgcttc 1133
Query: 1084 tga 1086
|||
Sbjct: 1134 tga 1136
>gnl|LJGI|GO012863 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 726
Score = 367 bits (185), Expect = e-100
Identities = 371/433 (85%), Gaps = 5/433 (1%)
Strand = Plus / Plus
Query: 431 aaatagatattgctccggtaattgagggtgctgtcaaccacattgcctcgagaagatttg 490
||||||||||||| || ||||||||| ||||||| ||||| ||||||| ||||| ||
Sbjct: 165 aaatagatattgcgccagtaattgagtgtgctgttcaccacgttgcctcaagaagcttca 224
Query: 491 agtttggaggtactgatctcactaattttctggcacaagaacttggcaaatccaatccgc 550
|||| ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |
Sbjct: 225 agttgggaggtatggatctaactaatttcctggctcaagaacttggcaagtccaatccac 284
Query: 551 tagtgaatatcagcatgtctgatgttgagaaaataaaacagcaatactcatgttgcgctg 610
|||| ||||||||| |||||||||| |||||||||||| ||||||||||||| || ||||
Sbjct: 285 tagtaaatatcagcctgtctgatgtggagaaaataaaagagcaatactcatgctgtgctg 344
Query: 611 aagatgatttagcttatcagaagacccaagattcttgccctgcggagacacatacccttc 670
||||||| ||||||||||||||||| || || |||| ||||| |||||||||||
Sbjct: 345 aagatgaattagcttatcagaagactgaa-----ctgtcctgtggagaaacatacccttc 399
Query: 671 ctgatggacaggtgatcacaattggaagagaaagatatactgtcggtgaagctttattcc 730
|||||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||||||
Sbjct: 400 ctgatggacaggtgataacaattgggagagaaagatacactgttggtgaagccttattcc 459
Query: 731 gtccatctctattgggtatagaggctcatggcattgttgagcagcttgtccgtactattt 790
|| ||| |||||| |||||||||||||||||||||||||||||||| | |||| ||
Sbjct: 460 agtcaagtctgttgggtttagaggctcatggcattgttgagcagcttgtcagaactagtt 519
Query: 791 ctagtgtgtcatctgataatcatcggcaacttctggagaataccgtggtttgtggtggca 850
| | ||| |||||||||||||| ||||| || || || ||||| ||||| ||||||||||
Sbjct: 520 caactgtatcatctgataatcaccggcagctgctagaaaatactgtggtgtgtggtggca 579
Query: 851 cttcttcaatgac 863
||||||| |||||
Sbjct: 580 cttcttctatgac 592
>gnl|LJGI|BP054187 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 525
Score = 329 bits (166), Expect = 2e-89
Identities = 324/377 (85%), Gaps = 5/377 (1%)
Strand = Plus / Minus
Query: 550 ctagtgaatatcagcatgtctgatgttgagaaaataaaacagcaatactcatgttgcgct 609
||||| ||||||||| |||||||||| |||||||||||| ||| ||||||||| || |||
Sbjct: 525 ctagtaaatatcagcctgtctgatgtggagaaaataaaagagcnatactcatgctgtgct 466
Query: 610 gaagatgatttagcttatcagaagacccaagattcttgccctgcggagacacataccctt 669
|||||||| ||||||||||||||||| || || |||| ||||| ||||||||||
Sbjct: 465 gaagatgaattagcttatcagaagactgaac-----tgtcctgtggagaaacataccctt 411
Query: 670 cctgatggacaggtgatcacaattggaagagaaagatatactgtcggtgaagctttattc 729
||||||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||||
Sbjct: 410 cctgatggacaggtgataacaattgggagagaaagatacactgttggtgaagccttattc 351
Query: 730 cgtccatctctattgggtatagaggctcatggcattgttgagcagcttgtccgtactatt 789
| || ||| |||||| |||||||||||||||||||||||||||||||| | |||| |
Sbjct: 350 cagtcaagtctgttgggtttagaggctcatggcattgttgagcagcttgtcagaactagt 291
Query: 790 tctagtgtgtcatctgataatcatcggcaacttctggagaataccgtggtttgtggtggc 849
|| | ||| |||||||||||||| ||||| || || || ||||| ||||| |||||||||
Sbjct: 290 tcaactgtatcatctgataatcaccggcagctgctagaaaatactgtggtgtgtggtggc 231
Query: 850 acttcttcaatgactggttttgaagagaggtttcagaaggaatctttcctaagttcatct 909
|||||||| ||||| |||||||||||||| ||||||||||||||| | ||||||||||
Sbjct: 230 acttcttctatgacaggttttgaagagagatttcagaaggaatctaacttaagttcatca 171
Query: 910 gctgttcgacctaccct 926
|||||| |||||||||
Sbjct: 170 actgttcaacctaccct 154
>gnl|LJGI|BP085427 homologue to UniRef100_Q0WW62 Cluster: Actin-like protein; n=1;
Arabidopsis thaliana|Rep: Actin-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (21%)
Length = 343
Score = 69.9 bits (35), Expect = 3e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 967 tattctgcttgggtgggaggtgccatacttgccaaagtagtttttcctcaaaaccagcat 1026
|||||||| ||||||||||||| ||| ||||| ||||||||||| |||||||| |||||
Sbjct: 343 tattctgcatgggtgggaggtgtcatccttgcaaaagtagttttccctcaaaatgagcat 284
Query: 1027 gtaacta 1033
||||||
Sbjct: 283 ataacta 277