Miyakogusa Predicted Gene
- Lj3g3v0826180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0826180.1 tr|G7IWV6|G7IWV6_MEDTR E3 ubiquitin-protein
ligase RNF181 OS=Medicago truncatula GN=MTR_3g031000
PE=,56.45,0.00000000006,ZF_RING_2,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type; seg,NULL;
RING/U-b,CUFF.41562.1
(654 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP064287 216 1e-55
gnl|LJGI|BW595619 216 1e-55
gnl|LJGI|TC77848 weakly similar to UniRef100_A3P4U5 Cluster: Rhs... 216 1e-55
gnl|LJGI|TC71614 similar to UniRef100_Q6X0N7 Cluster: Beta-galac... 208 3e-53
gnl|LJGI|CB827752 192 2e-48
gnl|LJGI|TC62698 153 2e-36
gnl|LJGI|AV779315 similar to UniRef100_A7QIZ6 Cluster: Chromosom... 127 9e-29
>gnl|LJGI|BP064287
Length = 500
Score = 216 bits (109), Expect = 1e-55
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 546 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 93
Query: 606 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 654
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 44
>gnl|LJGI|BW595619
Length = 287
Score = 216 bits (109), Expect = 1e-55
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 546 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 185
Query: 606 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 654
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 234
>gnl|LJGI|TC77848 weakly similar to UniRef100_A3P4U5 Cluster: Rhs element Vgr
protein; n=1; Burkholderia pseudomallei 1106a|Rep: Rhs
element Vgr protein - Burkholderia pseudomallei (strain
1106a), partial (4%)
Length = 977
Score = 216 bits (109), Expect = 1e-55
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 546 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 589
Query: 606 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 654
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 540
>gnl|LJGI|TC71614 similar to UniRef100_Q6X0N7 Cluster: Beta-galactosidase; n=1; Glycine
max|Rep: Beta-galactosidase - Glycine max (Soybean),
partial (26%)
Length = 1076
Score = 208 bits (105), Expect = 3e-53
Identities = 108/109 (99%)
Strand = Plus / Plus
Query: 546 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 983
Query: 606 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 654
||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 984 taagcctaaggttttgtggtgttgtgtagttctaactaaggatttctaa 1032
>gnl|LJGI|CB827752
Length = 432
Score = 192 bits (97), Expect = 2e-48
Identities = 106/109 (97%)
Strand = Plus / Plus
Query: 546 tgccaagattagcaagtgcacaagtgcatatataataaagaacacacacacccattgcct 605
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgccaagattagcaagtgtacaagtgcatatataataaagaacacacacacccattgcct 242
Query: 606 taagcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 654
||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 243 taagcctaaggttttgtggtggtgtgtggttctaacttaggatttctaa 291
>gnl|LJGI|TC62698
Length = 1191
Score = 153 bits (77), Expect = 2e-36
Identities = 99/106 (93%), Gaps = 4/106 (3%)
Strand = Plus / Plus
Query: 553 attagcaagtgcacaagtgcatatataataaagaacacacacac----ccattgccttaa 608
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 843 attagcaagtgcacaagtgcatatataataaagaacacacacatacatccattgccttaa 902
Query: 609 gcctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 654
||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 903 gcctaaggttttggggtgttgtgtggttctaacttaggatttctaa 948
>gnl|LJGI|AV779315 similar to UniRef100_A7QIZ6 Cluster: Chromosome chr2 scaffold_105
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (2%)
Length = 478
Score = 127 bits (64), Expect = 9e-29
Identities = 95/104 (91%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 551 agattagcaagtgcacaagtgcatatataataaagaacacacacacccattgccttaagc 610
|||||||| |||| ||| || |||||||||||||||||||||||||| |||||||||||
Sbjct: 154 agattagctagtgtacagatgtatatataataaagaacacacacaccccttgccttaagc 95
Query: 611 ctaaggttttgtggtgttgtgtggttctaactaaggatttctaa 654
|||||||||||||| | ||||||||||||||| |||||||||||
Sbjct: 94 ctaaggttttgtgg-ggtgtgtggttctaacttaggatttctaa 52