Miyakogusa Predicted Gene
- Lj3g3v0824890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0824890.1 Non Chatacterized Hit- tr|C5X1A9|C5X1A9_SORBI
Putative uncharacterized protein Sb01g008660
OS=Sorghu,32.22,1e-18,UPF0114,Uncharacterised protein family UPF0114;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.41520.1
(849 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57749 homologue to UniRef100_A7Q232 Cluster: Chromoso... 1675 0.0
gnl|LJGI|TC73088 homologue to UniRef100_A7Q232 Cluster: Chromoso... 773 0.0
>gnl|LJGI|TC57749 homologue to UniRef100_A7Q232 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (59%)
Length = 1017
Score = 1675 bits (845), Expect = 0.0
Identities = 848/849 (99%)
Strand = Plus / Plus
Query: 1 atggctctgtcctgttacaccttcatctctgcttctccaccttcactctcactccaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 atggctctgtcctgttacaccttcatctctgcttctccaccttcactctcactccaaagc 103
Query: 61 caccgtccctcacatcttccccgtcgagttttctatccaagtgcttccttaagctcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 caccgtccctcacatcttccccgtcgagttttctatccaagtgcttccttaagctcttca 163
Query: 121 tcccctgaatctactgcatcatcatcatcaccacaaagtggtccctctgcatcaaccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tcccctgaatctactgcatcatcatcatcaccacaaagtggtccctctgcatcaaccagc 223
Query: 181 accaccactaccaaagcttcatccaccccttttgtggagtctagaccacctgaccctgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 accaccactaccaaagcttcatccaccccttttgtggagtctagaccacctgaccctgcc 283
Query: 241 ttcaactatgcatatgccaacaccaatggcagcccgattgttaggatggttcgagccact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttcaactatgcatatgccaacaccaatggcagcccgattgttaggatggttcgagccact 343
Query: 301 gagtcttccattgaaaggatcattttcgacttccgtttcttggcactccttgctgttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gagtcttccattgaaaggatcattttcgacttccgtttcttggcactccttgctgttgga 403
Query: 361 ggttccttggctgggtcactcttgtgctttttaaatggctgcatttatatttttgatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ggttccttggctgggtcactcttgtgctttttaaatggctgcatttatatttttgatgca 463
Query: 421 tacaaagtctattggacatgctgtgtcaaaggagttcactctggaaagatggttttgcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tacaaagtctattggacatgctgtgtcaaaggagttcactctggaaagatggttttgcgg 523
Query: 481 ctggttgaagcaattgatgtttatcttgctggaacagtcatgttgatttttggtatgggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctggttgaagcaattgatgtttatcttgctggaacagtcatgttgatttttggtatgggc 583
Query: 541 ttatatggattgttcataagcaacacacctcctgatgtgccaccttctgtagaccgtgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttatatggattgttcataagcaacacacctcctgatgtgccaccttctgtagaccgtgcc 643
Query: 601 cttaaaggatcatctctatttgggatgtttgctttgaaggagaggcctaagtggatgaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cttaaaggatcatctctatttgggatgtttgctttgaaggagaggcctaagtggatgaaa 703
Query: 661 atcagctcacttgatgaactgaagacaaaagtggggcatgttattgtcatgattcttctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 atcagctcacttgatgaactgaagacaaaagtggggcatgttattgtcatgattcttctg 763
Query: 721 gtgaaaatgtttgagaggagcaaaatggttgccatttccacaggattggatttgcttagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gtgaaaatgtttgagaggagcaaaatggttgccatttccacaggattggatttgcttagt 823
Query: 781 tattcagtttgtattttcttatcatccgcatctttgtatatccttcataacctgcataag 840
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 824 tattcagtttgtattttcttatcatccgcatctttgtatatccttcataatctgcataag 883
Query: 841 actgactag 849
|||||||||
Sbjct: 884 actgactag 892
>gnl|LJGI|TC73088 homologue to UniRef100_A7Q232 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 575
Score = 773 bits (390), Expect = 0.0
Identities = 408/414 (98%)
Strand = Plus / Plus
Query: 436 acatgctgtgtcaaaggagttcactctggaaagatggttttgcggctggttgaagcaatt 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatgctgtgtcaaaggagttcactctggaaagatggttttgcggctggttgaagcaatt 60
Query: 496 gatgtttatcttgctggaacagtcatgttgatttttggtatgggcttatatggattgttc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgtttatcttgctggaacagtcatgttgatttttggtatgggcttatatggattgttc 120
Query: 556 ataagcaacacacctcctgatgtgccaccttctgtagaccgtgcccttaaaggatcatct 615
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 ataagcgacacacctcctgatgtgcccccttctgtagaccgtgcccttaaaggatcatct 180
Query: 616 ctatttgggatgtttgctttgaaggagaggcctaagtggatgaaaatcagctcacttgat 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctatttgggatgtttgctttgaaggagaggcctaagtggatgaaaatcagctcacttgat 240
Query: 676 gaactgaagacaaaagtggggcatgttattgtcatgattcttctggtgaaaatgtttgag 735
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaactgaagaccaaagtggggcatgttattgtcatgattcttctggtgaaaatgtttgag 300
Query: 736 aggagcaaaatggttgccatttccacaggattggatttgcttagttattcagtttgtatt 795
|||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 301 aggagccaaatggttgccatttcccccggattggatttgcttagttattcagtttgtatt 360
Query: 796 ttcttatcatccgcatctttgtatatccttcataacctgcataagactgactag 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcttatcatccgcatctttgtatatccttcataacctgcataagactgactag 414