Miyakogusa Predicted Gene
- Lj3g3v0824810.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0824810.3 Non Chatacterized Hit- tr|I1NHX5|I1NHX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24950
PE,73.19,0,STRUCTURAL MAINTENANCE OF CHROMOSOMES 5 SMC5,NULL;
STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 (SMC5, ,CUFF.41527.3
(3159 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62692 similar to UniRef100_A7Q229 Cluster: Chromosome... 866 0.0
gnl|LJGI|TC63703 similar to UniRef100_A7Q229 Cluster: Chromosome... 726 0.0
gnl|LJGI|TC78420 similar to UniRef100_A7Q229 Cluster: Chromosome... 424 e-117
>gnl|LJGI|TC62692 similar to UniRef100_A7Q229 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 897
Score = 866 bits (437), Expect = 0.0
Identities = 533/565 (94%)
Strand = Plus / Plus
Query: 2577 agcagacaaaaacgaaagtagaaggtgtctagctgaattagataacattaagggaaaatg 2636
|||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1 agcagacaaaaatgaatgtagaaggtgtttagctgaattagataacattaaggggaaatg 60
Query: 2637 gcttccaacactgagaaaccttgtggcccagataaatgaaacctttagatgtaattttca 2696
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttccaacactgagaaaccttgtagcccagataaatgaaacctttagatgtaattttca 120
Query: 2697 agagatggctgttgccggagaagtttcactagaagagcatgatatggacttcgataaatt 2756
|||||||||||||||||||||||| |||||||| |||||||||| | |||||||| ||||
Sbjct: 121 agagatggctgttgccggagaagtctcactagatgagcatgatacgaacttcgatcaatt 180
Query: 2757 cggaatacttataaaagtcaagttcagagaaaatagtcagcttcaaattctcagtgccca 2816
||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||
Sbjct: 181 tggaatacatataaaagtcaaattcagagaaaatggacagcttcaaattctcagtgccca 240
Query: 2817 tcatcaatctggaggggagcgatcagtttcaactattgtttatcttgtttcccttcaaga 2876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatcaatctggaggggagcgatcagtttcaactattgtttatcttgtttcccttcaaga 300
Query: 2877 tcttacaaactgcccatttagagttgttgatgagatcaaccaagggatggaccctataaa 2936
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 tcttactaactgcccatttagagttgttgatgagatcaaccaagggatggacccaataaa 360
Query: 2937 tgaaaggaagatgttccagcaactagtgagagcagcaagcaaggcaaacacaccacagtg 2996
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct: 361 tgaaaggaagatgttccagcaactagtgagagcagcaagcaagccaaatacaccacaatg 420
Query: 2997 tttcttgcttacccccaagttgctaccagatctgcaatatagtgaggcatgcagtatatt 3056
||||||||||||||| || |||||||||||||| |||||||||||||||||||| |||||
Sbjct: 421 tttcttgcttacccctaaattgctaccagatcttcaatatagtgaggcatgcagcatatt 480
Query: 3057 gaatgtaatgaatggcccttggatcggtcaagcatcgaaggtttggaccattggtgatag 3116
|||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||||
Sbjct: 481 gaatgtaatgaatggcccttggatcgagcaaccatcgaaggtgtggaccactggtgatcc 540
Query: 3117 ctggagtattataacgagacatgtc 3141
|||||||||||||||| ||||||||
Sbjct: 541 ctggagtattataacgggacatgtc 565
>gnl|LJGI|TC63703 similar to UniRef100_A7Q229 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 704
Score = 726 bits (366), Expect = 0.0
Identities = 510/558 (91%)
Strand = Plus / Plus
Query: 1 atggtggaatctcgctcccctaagcgccacaaaatcacaaggggagaagatgattatatg 60
|||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 147 atggcggaatctcgcccccctaagcgctccaaaatcaccaggggagaagatgattatatg 206
Query: 61 cctggaaatattcttgagattgagctttctaatttcatgacttttgattacttaaaatgt 120
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 207 cctggaaatattcttgagattgagcttcataatttcatgacctttgattacttaaaatgt 266
Query: 121 aaacctggtccccgattgaatcttgtaattggacctaatggttctggaaagagttctctt 180
||||||| || |||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 267 aaacctgcgcctcgattgaatcttgtaattgggcccaatggttctggaaagagttctctt 326
Query: 181 gtatgtgctattgctcttggcctcggcggagagccccagctgcttgggagagctacaaag 240
|||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||
Sbjct: 327 gtatgtgctattgctcttggcctcggtggagagccccagctgcttgggcgagccacaagt 386
Query: 241 attggggaatatgtaaaacggggagaagattccggcttcattaaggttaccttgagaggg 300
||||||| |||||| ||||| |||||||| || |||| ||||||| ||||||||||||||
Sbjct: 387 attggggcatatgtgaaacgaggagaagagtctggctacattaagattaccttgagaggg 446
Query: 301 gatcataaagaggagcgcattaccattacgcggcaaataaatgcttacaacacgtccgaa 360
|| ||||||||||||||| ||| ||||| ||| |||||||| || |||||| ||| |||
Sbjct: 447 gaccataaagaggagcgccttatcattatgcgtaaaataaatactaacaacaagtctgaa 506
Query: 361 tggttgttcaatggaaatgtagttcccagaaaggatgtggttgaaaccattcagaagctt 420
||||||||||||||||||||||| |||| ||||||||| | ||||| |||||||| | ||
Sbjct: 507 tggttgttcaatggaaatgtagtacccaaaaaggatgttgctgaaagcattcagaggttt 566
Query: 421 aacatccaagtcgataatttgactcaatttttaccgcaagacagggtatgtcagtttgca 480
|||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 567 aacatccaagtcaataatttgactcaatttttaccgcaagacagggtatgtgagtttgcg 626
Query: 481 aagttaactcctgtgcaacttctggaagagactgaaaaggctgttggtgatccacagctt 540
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 627 aagttaactcctgtccaacttctggaagagactgaaaaggttgttggtgatccacagctt 686
Query: 541 ccagagcaacatcgtgca 558
|| |||||||||||||||
Sbjct: 687 ccggagcaacatcgtgca 704
>gnl|LJGI|TC78420 similar to UniRef100_A7Q229 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 717
Score = 424 bits (214), Expect = e-117
Identities = 256/270 (94%)
Strand = Plus / Plus
Query: 2723 cactagaagagcatgatatggacttcgataaattcggaatacttataaaagtcaagttca 2782
||||||| |||||||||| | |||||||| |||| ||||||| |||||||||||| ||||
Sbjct: 1 cactagatgagcatgatacgaacttcgatcaatttggaatacatataaaagtcaaattca 60
Query: 2783 gagaaaatagtcagcttcaaattctcagtgcccatcatcaatctggaggggagcgatcag 2842
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaaaatggacagcttcaaattctcagtgcccatcatcaatctggaggggagcgatcag 120
Query: 2843 tttcaactattgtttatcttgtttcccttcaagatcttacaaactgcccatttagagttg 2902
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 tttcaactattgtttatcttgtttcccttcaagatcttactaactgcccatttagagttg 180
Query: 2903 ttgatgagatcaaccaagggatggaccctataaatgaaaggaagatgttccagcaactag 2962
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 ttgatgagatcaaccaagggatggacccaataaatgaaaggaagatgttccagcaactag 240
Query: 2963 tgagagcagcaagcaaggcaaacacaccac 2992
||||||||||||||||| | || |||||||
Sbjct: 241 tgagagcagcaagcaagcccaatacaccac 270
Score = 141 bits (71), Expect = 3e-32
Identities = 101/111 (90%)
Strand = Plus / Plus
Query: 3031 caatatagtgaggcatgcagtatattgaatgtaatgaatggcccttggatcggtcaagca 3090
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||
Sbjct: 277 caatatagtgaggcatgcagcatattgaatgtaatgaatggcccttggatcgagcaacca 336
Query: 3091 tcgaaggtttggaccattggtgatagctggagtattataacgagacatgtc 3141
| |||||| ||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 337 ttgaaggtgtggaccactggtgatccctggagtattataacgggacatgtc 387