Miyakogusa Predicted Gene
- Lj3g3v0824800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0824800.1 tr|A9RY09|A9RY09_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,33.89,6e-19,DUF3411,Protein of unknown function DUF3411;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.41517.1
(834 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65033 similar to UniRef100_A7Q227 Cluster: Chromosome... 795 0.0
gnl|LJGI|TC60010 similar to UniRef100_A7Q227 Cluster: Chromosome... 208 4e-53
>gnl|LJGI|TC65033 similar to UniRef100_A7Q227 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 990
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 386 tgatagtgcggaggtacttccagttggaggagtcggctgtgttccggtggctgatgaaat 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatagtgcggaggtacttccagttggaggagtcggctgtgttccggtggctgatgaaat 60
Query: 446 tcggagggtttaaggaaaggttgttgggtgatgatttgttcttaaccaagcttattatgg 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcggagggtttaaggaaaggttgttgggtgatgatttgttcttaaccaagcttattatgg 120
Query: 506 agtgtactgttgtaatcttcacaaaggcagctgcagaattggagcggcgtaaagaaaaat 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtgtactgttgtaatcttcacaaaggcagctgcagaattggagcggcgtaaagaaaaat 180
Query: 566 tcactaaggagctggactttgttgttgctaatgtggtaacaggaattgtcacaggttttg 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcactaaggagctggactttgttgttgctaatgtggtaacaggaattgtcacaggttttg 240
Query: 626 tgcttgtgtggtttcctgctcctattctttctctaaaaccacctcttgcagttagcgctg 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcttgtgtggtttcctgctcctattctttctctaaaaccacctcttgcagttagcgctg 300
Query: 686 gacctatcgcgaaactcttctatggttgtcctgaaaatgcttttcaggtagctttagctg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacctatcgcgaaactcttctatggttgtcctgaaaatgcttttcaggtagctttagctg 360
Query: 746 gaacatcatatacaattctacaaagaataggtgcaatagtg 786
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaacatcatatacaattctacaaagaataggtgcaatagtg 401
>gnl|LJGI|TC60010 similar to UniRef100_A7Q227 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1564
Score = 208 bits (105), Expect = 4e-53
Identities = 411/513 (80%)
Strand = Plus / Plus
Query: 274 agggaccgcaacagggaagaggccatgctggtgctggcggaggctggcaagtcgctggag 333
||||| |||||||| | |||||| ||||||| || ||||||| || ||| ||||||||
Sbjct: 324 agggatcgcaacagaggagaggcgctgctggttctcgcggaggtcgggaagccgctggag 383
Query: 334 aattttccggctgatttggcggcggccgttacggcggggcgggtgccgggtttgatagtg 393
|||| ||||||||||| |||||||| | |||||||||| | ||||| | || |||
Sbjct: 384 tatttgccggctgatttagcggcggcgatggaggcggggcggattccggggtcaattgtg 443
Query: 394 cggaggtacttccagttggaggagtcggctgtgttccggtggctgatgaaattcggaggg 453
|||||||||| || | ||| | ||||| ||||||||||||||| | || ||||| |||
Sbjct: 444 aagaggtacttcgagctcgagaaatcggcggtgttccggtggctgctcaacttcggtggg 503
Query: 454 tttaaggaaaggttgttgggtgatgatttgttcttaaccaagcttattatggagtgtact 513
|| ||||| |||||| ||| |||||||||||| | ||||| || ||||||||| |
Sbjct: 504 ttcaaggagaggttgctggcggatgatttgttcctcgccaaggttgccatggagtgtggt 563
Query: 514 gttgtaatcttcacaaaggcagctgcagaattggagcggcgtaaagaaaaattcactaag 573
|||| |||||||||||| ||||||| || |||||| ||| |||||||| ||||| |||
Sbjct: 564 gttgggatcttcacaaagacagctgcggagttggagaagcgcaaagaaaatttcacaaag 623
Query: 574 gagctggactttgttgttgctaatgtggtaacaggaattgtcacaggttttgtgcttgtg 633
||||| || |||||| |||| ||||||||| | ||||| ||| |||| ||||||||
Sbjct: 624 gagcttgattttgtttgtgctgatgtggtaatggccattgtggcagattttatgcttgtg 683
Query: 634 tggtttcctgctcctattctttctctaaaaccacctcttgcagttagcgctggacctatc 693
||| |||||||||| | ||||||| |||||| ||||| ||||| |||||| ||||
Sbjct: 684 tggcttcctgctcccacagtttctctccgaccaccacttgctgttagtgctggaactatt 743
Query: 694 gcgaaactcttctatggttgtcctgaaaatgcttttcaggtagctttagctggaacatca 753
|| ||| |||||||||| || ||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 744 gccaaattcttctatggctgccctgataatgctttccaggtggctttggctggaacctct 803
Query: 754 tatacaattctacaaagaataggtgcaatagtg 786
| |||| || |||| ||||||||||| ||||||
Sbjct: 804 tttacacttatacagagaataggtgctatagtg 836